RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ISLR2Q6UXK2 745 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 Q6ZS92 163 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 ACMSDQ8TDX5 336 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 GAL3ST3Q96A11 431 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 TBC1D20Q96BZ9 403 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 C19orf60Q96EN9 201 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 PTCD3Q96EY7 689 aaKnown RBP13.7□□□□□ -0.22
LITAF-208ENST00000571627 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 CNDP1Q96KN2 507 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 IMMP1LQ96LU5 166 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 OR1F2PQ96R84 312 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 MRPL57Q9BQC6 102 aaKnown RBP13.7□□□□□ -0.22
LITAF-208ENST00000571627 TUBB6Q9BUF5 446 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 EPS8L2Q9H6S3 715 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 ZNF358Q9NW07 568 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 COPG2Q9UBF2 871 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 PTPN13Q12923 2485 aa13.7□□□□□ -0.22
LITAF-208ENST00000571627 USP9XQ93008 2570 aaPredicted RBP13.7□□□□□ -0.22
LITAF-208ENST00000571627 LRIT2A6NDA9 550 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 ANKDD1BA6NHY2 528 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 FAM227AF5H4B4 570 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 SMIM24O75264 130 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 CLEC3AO75596 197 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 F10P00742 488 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 TUBBP07437 444 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 CYC1P08574 325 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 SOX11P35716 441 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 PLA2G16P53816 162 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 STXBP1P61764 594 aaKnown RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 BTG2P78543 158 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 NAA30Q147X3 362 aaPredicted RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 RASA2Q15283 850 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 NSDHLQ15738 373 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 TBCCQ15814 346 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 HIST2H2ACQ16777 129 aaPredicted RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 PFKFB4Q16877 469 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 CRB2Q5IJ48 1285 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 HIST2H2AA3Q6FI13 130 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 ATCAYQ86WG3 371 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 TDRPQ86YL5 185 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 IQCKQ8N0W5 287 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 CA13Q8N1Q1 262 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 PPP4R1Q8TF05 950 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 MS4A6EQ96DS6 147 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 WDR34Q96EX3 536 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 EFCAB11Q9BUY7 163 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 CPSF2Q9P2I0 782 aaKnown RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 C19orf25Q9UFG5 118 aaPredicted RBP13.69□□□□□ -0.22
LITAF-208ENST00000571627 ANGPTL3Q9Y5C1 460 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 DOPEY2Q9Y3R5 2298 aa13.69□□□□□ -0.22
LITAF-208ENST00000571627 MAGEB17A8MXT2 336 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 WFS1O76024 890 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 RNH1P13489 461 aaKnown RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 EPB42P16452 691 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 MAOAP21397 527 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 IL10P22301 178 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 GNLYP22749 145 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 JAK1P23458 1154 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 HPDP32754 393 aaPredicted RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 HSD17B3P37058 310 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 CASP2P42575 452 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 PCDH1Q08174 1060 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 RUNX2Q13950 521 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 ESPL1Q14674 2120 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 PCBP2Q15366 365 aaKnown RBP eCLIP13.68□□□□□ -0.22
LITAF-208ENST00000571627 ERCC6LQ2NKX8 1250 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 PAPD4Q6PIY7 484 aaKnown RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 RIPOR1Q6ZS17 1223 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 DNAJB14Q8TBM8 379 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 UBE2E3Q969T4 207 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 SNRNP40Q96DI7 357 aaKnown RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 FAR2Q96K12 515 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 MAGEB10Q96LZ2 347 aaPredicted RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 F2RL3Q96RI0 385 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 REXO4Q9GZR2 422 aaKnown RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 PRM3Q9NNZ6 103 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 ASF1BQ9NVP2 202 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 XPR1Q9UBH6 696 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.68□□□□□ -0.22
LITAF-208ENST00000571627 TBK1Q9UHD2 729 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 NTNG1Q9Y2I2 539 aa13.68□□□□□ -0.22
LITAF-208ENST00000571627 V9GYY5 206 aaPredicted RBP13.68□□□□□ -0.22
LITAF-208ENST00000571627 STX16-NPEPL1H3BU86 382 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PSMD12O00232 456 aaPredicted RBP13.67□□□□□ -0.22
LITAF-208ENST00000571627 STX16O14662 325 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 PRMT3O60678 531 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 VPS4BO75351 444 aa13.67□□□□□ -0.22
LITAF-208ENST00000571627 SH3BGRLO75368 114 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms