RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 LRRC23Q53EV4 343 aaPredicted RBP16.91■□□□□ 0.3
NEIL1-221ENST00000569035 PYCR3Q53H96 274 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 RBM44Q6ZP01 1051 aaKnown RBP16.91■□□□□ 0.3
NEIL1-221ENST00000569035 ARMCX6Q7L4S7 300 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 PTOV1Q86YD1 416 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 CLDN23Q96B33 292 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 SLC17A9Q9BYT1 436 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 RBM38Q9H0Z9 239 aaKnown RBP16.91■□□□□ 0.3
NEIL1-221ENST00000569035 CHST8Q9H2A9 424 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 NEUROD4Q9HD90 331 aa16.91■□□□□ 0.3
NEIL1-221ENST00000569035 ZFR2Q9UPR6 939 aaKnown RBP16.91■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3DA0A087WVF3 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3IA0A087WXS9 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3EA0A087X179 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3KA0A087X1G2 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3FA6NER0 549 aaPredicted RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3LB9A6J9 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 SLC16A6O15403 523 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 CAPN5O15484 640 aaPredicted RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 SUV39H1O43463 412 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 CLEC3AO75596 197 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 DNAJB5O75953 348 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 ZNF682O95780 498 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 MT-ND1P03886 318 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 SEMG1P04279 462 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3HP0C7X1 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 ITGA2P17301 1181 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 HLCSP50747 726 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 CLCNKAP51800 687 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TPD52P55327 224 aaPredicted RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 GABARAPL2P60520 117 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TMEM35AQ53FP2 167 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3GQ6DHY5 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3CQ6IPX1 549 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 SPESP1Q6UW49 350 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 HORMAD1Q86X24 394 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TBC1D3Q8IZP1 549 aaPredicted RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 CLECL1Q8IZS7 167 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TSTD1Q8NFU3 115 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 OR2L8Q8NGY9 312 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 HDAC2Q92769 488 aaKnown RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 KLK6Q92876 244 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 ZNF347Q96SE7 839 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 MS4A8Q9BY19 250 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 OR51B5Q9H339 312 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 THUMPD1Q9NXG2 353 aaKnown RBP16.9■□□□□ 0.3
NEIL1-221ENST00000569035 SLC23A2Q9UGH3 650 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 TAC3Q9UHF0 121 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 PADI2Q9Y2J8 665 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 ZNF451Q9Y4E5 1061 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 PCDHGB5Q9Y5G0 923 aa16.9■□□□□ 0.3
NEIL1-221ENST00000569035 CCDC160A6NGH7 325 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 GUCY1B2O75343 617 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 FKBP9O95302 570 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 PDGFBP01127 241 aaPredicted RBP16.89■□□□□ 0.3
NEIL1-221ENST00000569035 ITGAMP11215 1152 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 ACSL1P33121 698 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 NKG7Q16617 165 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 CCDC80Q76M96 950 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 GPR141Q7Z602 305 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 NUDT13Q86X67 352 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 METTL25Q8N6Q8 603 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 FAM86B1Q8N7N1 296 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 RGMAQ96B86 450 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 SCARF2Q96GP6 870 aaPredicted RBP16.89■□□□□ 0.3
NEIL1-221ENST00000569035 FERD3LQ96RJ6 166 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 CARS2Q9HA77 564 aaKnown RBP16.89■□□□□ 0.3
NEIL1-221ENST00000569035 FAM118AQ9NWS6 357 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 ZSCAN32Q9NX65 697 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 RSL24D1Q9UHA3 163 aaKnown RBP16.89■□□□□ 0.3
NEIL1-221ENST00000569035 CIDEBQ9UHD4 219 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.89■□□□□ 0.3
NEIL1-221ENST00000569035 COLEC10Q9Y6Z7 277 aa16.89■□□□□ 0.3
NEIL1-221ENST00000569035 NCOR1O75376 2440 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 A0A1W2PQU0 124 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 A0A1W2PRB8 838 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 TOR1BO14657 336 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 RNGTTO60942 597 aaKnown RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 PAK4O96013 591 aaPredicted RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 DDCP20711 480 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 UQCRC2P22695 453 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 RYKP34925 604 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 PEX19P40855 299 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 ITGA1P56199 1179 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 TAS2R50P59544 299 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 KIAA1024LP59773 190 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 PRDX1Q06830 199 aaKnown RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 KRT33BQ14525 404 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 ZBED5Q49AG3 693 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 GCNT6Q5T4J0 391 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 TBPL2Q6SJ96 375 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 SRFBP1Q8NEF9 429 aaKnown RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 ZNF420Q8TAQ5 688 aaPredicted RBP16.89■□□□□ 0.29
NEIL1-221ENST00000569035 MAGED4Q96JG8 741 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 C12orf66Q96MD2 445 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 SLC35A5Q9BS91 424 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 DOHHQ9BU89 302 aa16.89■□□□□ 0.29
NEIL1-221ENST00000569035 MENTQ9BUN1 341 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms