RNA–Protein interactions for RNA: ENST00000568870.1

TCF25-223, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 263 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-223	ENST00000568870	HCN3	Q9P1Z3	774 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	IFT80	Q9P2H3	777 aa	Predicted RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	GPN3	Q9UHW5	284 aa	Predicted RBP	13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	PADI1	Q9ULC6	663 aa		13.18	□□□□□ -0.3
TCF25-223	ENST00000568870	ATP6AP2	A0A1C7CYW4	349 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ARHGAP10	A1A4S6	786 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870		C9J4A7	227 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870		H0YIG0	161 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	B3GALT2	O43825	422 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ATP6AP2	O75787	350 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	RSL1D1	O76021	490 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	SEMA3D	O95025	777 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	GBA	P04062	536 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	JUN	P05412	331 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	VIM	P08670	466 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	LIPC	P11150	499 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ITGAX	P20702	1163 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	HIST1H1T	P22492	207 aa	Predicted RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	PCBP4	P57723	403 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ACSM2A	Q08AH3	577 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	MAP7	Q14244	749 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	SYT16	Q17RD7	645 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	GALNTL6	Q49A17	601 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	MLIP	Q5VWP3	458 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF385C	Q66K41	422 aa	Predicted RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ACSM2B	Q68CK6	577 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	LCN10	Q6JVE6	187 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ZNF793	Q6ZN11	406 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	PAGE2	Q7Z2X7	111 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	COMMD6	Q7Z4G1	85 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	NUDT13	Q86X67	352 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	CACNA2D3	Q8IZS8	1091 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	C1orf52	Q8N6N3	182 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	IL22RA1	Q8N6P7	574 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	OR5T3	Q8NGG3	340 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	OR2T11	Q8NH01	316 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	TUBGCP3	Q96CW5	907 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	APIP	Q96GX9	242 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	NAF1	Q96HR8	494 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	QRFPR	Q96P65	431 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	SERINC2	Q96SA4	455 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	DPH2	Q9BQC3	489 aa	Predicted RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	CHST8	Q9H2A9	424 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	CCDC86	Q9H6F5	360 aa	Known RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	PRDM7	Q9NQW5	492 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	RIC8B	Q9NVN3	520 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	TRPC4	Q9UBN4	977 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	ACSL6	Q9UKU0	697 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	SCN2A	Q99250	2005 aa		13.17	□□□□□ -0.3
TCF25-223	ENST00000568870	SEC16A	O15027	2179 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	SLCO1B7	G3V0H7	640 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	HDAC3	O15379	428 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	SEC22B	O75396	215 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	EED	O75530	441 aa	Known RBP	13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	KLK1	P06870	262 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	TCN2	P20062	427 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	ATP5A1	P25705	553 aa	Known RBP	13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	BSG	P35613	385 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	HK2	P52789	917 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	TBL3	Q12788	808 aa	Known RBP	13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	SLAMF1	Q13291	335 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	DSG2	Q14126	1118 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	TGIF1	Q15583	401 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	SPIN4	Q56A73	249 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	CYP20A1	Q6UW02	462 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	RNF165	Q6ZSG1	346 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	WDR75	Q8IWA0	830 aa	Known RBP	13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	METTL4	Q8N3J2	472 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	AMER3	Q8N944	861 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	ACOT4	Q8N9L9	421 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	CT55	Q8WUE5	264 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	GATA6	Q92908	595 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	FGF11	Q92914	225 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	PEX11G	Q96HA9	241 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	C3orf30	Q96M34	536 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	CCT7	Q99832	543 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	EBPL	Q9BY08	206 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	RBCK1	Q9BYM8	510 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	LRTM1	Q9HBL6	345 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	SLC22A11	Q9NSA0	550 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	VTI1B	Q9UEU0	232 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	GIMAP2	Q9UG22	337 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	FBXW2	Q9UKT8	454 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	USH1C	Q9Y6N9	552 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	CACNA1A	O00555	2505 aa		13.16	□□□□□ -0.3
TCF25-223	ENST00000568870	CCDC88C	Q9P219	2028 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	TRPC5OS	A6NMA1	111 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	PSMD12	O00232	456 aa	Predicted RBP	13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	LSM1	O15116	133 aa	Known RBP	13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	CHST10	O43529	356 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	PCDH7	O60245	1069 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	EDF1	O60869	148 aa	Known RBP	13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	DNAJB6	O75190	326 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	PEX11A	O75192	247 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	MYO1D	O94832	1006 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	DLST	P36957	453 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	STAT5A	P42229	794 aa		13.15	□□□□□ -0.3
TCF25-223	ENST00000568870	TSFM	P43897	325 aa	Known RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms