RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 EFCAB8A8MWE9 144 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 CLGNO14967 610 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 B3GALT2O43825 422 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 NEURL1O76050 574 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 WDR47O94967 919 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 SEC31AO94979 1220 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 C1GALT1C1LP0DN25 315 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 TPP2P29144 1249 aaPredicted RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 ITGA8P53708 1063 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 SNRPNP63162 240 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 POU4F1Q01851 419 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 CALCOCO2Q13137 446 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 C3AR1Q16581 482 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 ZXDCQ2QGD7 858 aaPredicted RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 TRIM40Q6P9F5 258 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 TRMT10BQ6PF06 316 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 GPALPP1Q8IXQ4 340 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 ARMC10Q8N2F6 343 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 FBXO36Q8NEA4 188 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 SRFBP1Q8NEF9 429 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 B3GNT7Q8NFL0 401 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 PHF10Q8WUB8 498 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 CCT6BQ92526 530 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 VMP1Q96GC9 406 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 UNKQ9C0B0 810 aaKnown RBP17.42■□□□□ 0.38
LINC01238-205ENST00000567549 RHBGQ9H310 441 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 EHD1Q9H4M9 534 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 NT5DC2Q9H857 520 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 COQ3Q9NZJ6 369 aa17.42■□□□□ 0.38
LINC01238-205ENST00000567549 IGKV3D-11A0A0A0MRZ8 115 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 E9PLN8 166 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 TFECO14948 347 aaPredicted RBP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 CLDN14O95500 239 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 S100BP04271 92 aaPredicted RBP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 MAOAP21397 527 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 BTN3A2P78410 334 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 SLC13A2Q13183 592 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 LAPTM5Q13571 262 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 EFTUD2Q15029 972 aaKnown RBP eCLIP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 HIST2H2ACQ16777 129 aaPredicted RBP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 PAGE2BQ5JRK9 111 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 HP1BP3Q5SSJ5 553 aaPredicted RBP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 HIST2H2AA3Q6FI13 130 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 PAOXQ6QHF9 649 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 ZNF595Q8IYB9 648 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 KLHDC8AQ8IYD2 350 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 ANKRD53Q8N9V6 530 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 CAPZA3Q96KX2 299 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 NAPGQ99747 312 aaPredicted RBP17.41■□□□□ 0.38
LINC01238-205ENST00000567549 VKORC1Q9BQB6 163 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 DERL2Q9GZP9 239 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 PRM3Q9NNZ6 103 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 TIMMDC1Q9NPL8 285 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 MOCS1Q9NZB8 636 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 WWOXQ9NZC7 414 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 SLC17A6Q9P2U8 582 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 TINAGQ9UJW2 476 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 MEMO1Q9Y316 297 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 SPACA6W5XKT8 324 aa17.41■□□□□ 0.38
LINC01238-205ENST00000567549 ERI3O43414 337 aaKnown RBP17.4■□□□□ 0.38
LINC01238-205ENST00000567549 CLEC3AO75596 197 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 SMIM10L1P0DMW3 83 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 RAB38P57729 211 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 ATP6V0D1P61421 351 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 ANKMY2Q8IV38 441 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 CYP4Z2PQ8N1L4 340 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 CA13Q8N1Q1 262 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 TMEM132CQ8N3T6 1108 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 CREB3L4Q8TEY5 395 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 PYROXD1Q8WU10 500 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 DAZLQ92904 295 aaKnown RBP17.4■□□□□ 0.38
LINC01238-205ENST00000567549 MTFMTQ96DP5 389 aaKnown RBP17.4■□□□□ 0.38
LINC01238-205ENST00000567549 SMIM10Q96HG1 83 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 NPAS2Q99743 824 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 EFCAB11Q9BUY7 163 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 PRTFDC1Q9NRG1 225 aa17.4■□□□□ 0.38
LINC01238-205ENST00000567549 YARS2Q9Y2Z4 477 aaKnown RBP17.4■□□□□ 0.38
LINC01238-205ENST00000567549 GTF3C1Q12789 2109 aa17.39■□□□□ 0.38
LINC01238-205ENST00000567549 TRBV11-1A0A0K0K1C0 115 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 E7ESA3 106 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 CDC7O00311 574 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 EIF3HO15372 352 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC01238-205ENST00000567549 ZFAND5O76080 213 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
LINC01238-205ENST00000567549 MYO1DO94832 1006 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 TFEBP19484 476 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SSTR2P30874 369 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SSR4P51571 173 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 TAS2R39P59534 338 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 BTG2P78543 158 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SLBPQ14493 270 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC01238-205ENST00000567549 TGFBIQ15582 683 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 TSNQ15631 228 aaKnown RBP17.39■□□□□ 0.37
LINC01238-205ENST00000567549 TMEM211Q6ICI0 200 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SULT1C3Q6IMI6 304 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SLCO4C1Q6ZQN7 724 aa17.39■□□□□ 0.37
LINC01238-205ENST00000567549 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC01238-205ENST00000567549 ZBED8Q8IZ13 594 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms