RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 YAE1D1Q9NRH1 226 aa8.4□□□□□ -1.06
VPS9D1-205ENST00000565452 DEPPQ9NTK1 212 aa8.4□□□□□ -1.06
VPS9D1-205ENST00000565452 NDRG3Q9UGV2 375 aa8.4□□□□□ -1.06
VPS9D1-205ENST00000565452 YARS2Q9Y2Z4 477 aaKnown RBP8.4□□□□□ -1.06
VPS9D1-205ENST00000565452 CHD3Q12873 2000 aaKnown RBP8.4□□□□□ -1.06
VPS9D1-205ENST00000565452 ANK3Q12955 4377 aaKnown RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TRGV5A0A0B4J1U4 118 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 ATP6AP2A0A1C7CYW4 349 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 PINLYPA6NC86 204 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM187AA6NFU0 413 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 A8MVJ9 347 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 ESPNB1AK53 854 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 E7EVH7 732 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 KPNA5O15131 536 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 SPRY1O43609 319 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 ATP6AP2O75787 350 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 CDC123O75794 336 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 GLSO94925 669 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 EPPINO95925 133 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 PSMB4P28070 264 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 RPL22P35268 128 aaKnown RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 HSD17B2P37059 387 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 PPARGP37231 505 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 MAGEA5P43359 124 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 CLCN2P51788 898 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 GDF10P55107 478 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TSTA3Q13630 321 aaPredicted RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TMED2Q15363 201 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TYSND1Q2T9J0 566 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 ULK2Q8IYT8 1036 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TMEM251Q8N6I4 163 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 CEP112Q8N8E3 955 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TNIP2Q8NFZ5 429 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 SMPDL3AQ92484 453 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 TSLPQ969D9 159 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 PEX11GQ96HA9 241 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM173AQ9BQD7 235 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 C10orf88Q9H8K7 445 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 ETNK1Q9HBU6 452 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 EIF2B3Q9NR50 452 aaKnown RBP8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 RAB6BQ9NRW1 208 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 HPF1Q9NWY4 346 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 SPATA7Q9P0W8 599 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 FBXW2Q9UKT8 454 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 NPFFR2Q9Y5X5 522 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 LIPGQ9Y5X9 500 aa8.39□□□□□ -1.07
VPS9D1-205ENST00000565452 SH3D21A4FU49 640 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 P2RX6O15547 441 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 OR1I1O60431 355 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 METTL18O95568 372 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 FAM157CP0CG43 387 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 TPSB2P20231 275 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 JAK1P23458 1154 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 AOAHP28039 575 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 OPRM1P35372 400 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 DEKP35659 375 aaKnown RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 MAGEA6P43360 314 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 NPY2RP49146 381 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 PTH2RP49190 550 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 ABATP80404 500 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 KRTAP1-1Q07627 177 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 CDH17Q12864 832 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 TNK1Q13470 666 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 TPSAB1Q15661 275 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 HYAL4Q2M3T9 481 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 CCSMST1Q4G0I0 132 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 ANKRD20A4Q4UJ75 823 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 GLE1Q53GS7 698 aaKnown RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 C10orf62Q5T681 223 aaPredicted RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 DENND5AQ6IQ26 1287 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF425Q6IV72 752 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 TTC27Q6P3X3 843 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 SUSD1Q6UWL2 747 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 IL20RBQ6UXL0 311 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 SEM1Q6ZVN7 128 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 ADCK2Q7Z695 626 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 LACC1Q8IV20 430 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 MEIOBQ8N635 442 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 BBOF1Q8ND07 529 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 MCUQ8NE86 351 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 NFAM1Q8NET5 270 aaPredicted RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 KIAA1191Q96A73 305 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 PTCHD1Q96NR3 888 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 TBL1YQ9BQ87 522 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 CCDC77Q9BR77 488 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 SYNPO2LQ9H987 977 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 UBTD1Q9HAC8 227 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 LRTM1Q9HBL6 345 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 LANCL2Q9NS86 450 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 ZNF407Q9C0G0 2248 aa8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 SNRNP200O75643 2136 aaKnown RBP8.38□□□□□ -1.07
VPS9D1-205ENST00000565452 KCNE1BA0A087WTH5 132 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 IGKV1-8A0A0C4DH67 115 aa8.37□□□□□ -1.07
VPS9D1-205ENST00000565452 MAGEB16A2A368 324 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms