RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 RAB10P61026 200 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 ATP6V0D1P61421 351 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 STXBP1P61764 594 aaKnown RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 BTN3A2P78410 334 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 DLG1Q12959 904 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 RUNX2Q13950 521 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 SLMAPQ14BN4 828 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 OR1C1Q15619 314 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 C1QL3Q5VWW1 255 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 ZNF787Q6DD87 383 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 SPINK14Q6IE38 97 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 SULT1C3Q6IMI6 304 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 ZNF572Q7Z3I7 529 aaPredicted RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CMC1Q7Z7K0 106 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 TCAIMQ8N3R3 496 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 PDPRQ8NCN5 879 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 NFAM1Q8NET5 270 aaPredicted RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CCT6BQ92526 530 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 EXT2Q93063 718 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 KIAA1191Q96A73 305 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 UTP23Q9BRU9 249 aaKnown RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 RAB17Q9H0T7 212 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 NT5DC2Q9H857 520 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CNOT10Q9H9A5 744 aaKnown RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CLK4Q9HAZ1 481 aaKnown RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 PRDM9Q9NQV7 894 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 KLHL1Q9NR64 748 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 DNAJC11Q9NVH1 559 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 PTBP2Q9UKA9 531 aaKnown RBP9.4□□□□□ -0.9
CMTM3-209ENST00000565003 CLDN16Q9Y5I7 305 aa9.4□□□□□ -0.9
CMTM3-209ENST00000565003 A8MUA0 341 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 H2AFYO75367 372 aaKnown RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CLEC3AO75596 197 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 NEURL1O76050 574 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CRYABP02511 175 aaKnown RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CERS1P27544 350 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 GSTM2P28161 218 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 STX2P32856 288 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 SPRP35270 261 aaPredicted RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 DCTP40126 519 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 PLA2G16P53816 162 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 TAS2R50P59544 299 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 SLC7A5Q01650 507 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 OC90Q02509 493 aaPredicted RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CAV1Q03135 178 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 DOC2AQ14183 400 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 PDK4Q16654 411 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ADPRMQ3LIE5 342 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 XKR6Q5GH73 641 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CDKL4Q5MAI5 379 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 GRTP1Q5TC63 336 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF468Q5VIY5 522 aaPredicted RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 GFRALQ6UXV0 394 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ISCA2Q86U28 154 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 FJX1Q86VR8 437 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 SCUBE1Q8IWY4 988 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 LGI4Q8N135 537 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 KRT78Q8N1N4 520 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 SNX31Q8N9S9 440 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 FAM47BQ8NA70 645 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 TMEM52Q8NDY8 209 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 TTLQ8NG68 377 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 DNAJB8Q8NHS0 232 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 WDR34Q96EX3 536 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 SCMH1Q96GD3 660 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 QRFPRQ96P65 431 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CSF3RQ99062 836 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CAPS2Q9BXY5 557 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 PITHD1Q9GZP4 211 aaPredicted RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CDCP1Q9H5V8 836 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ALG9Q9H6U8 611 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 IGSF5Q9NSI5 407 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 CD274Q9NZQ7 290 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ZNF490Q9ULM2 529 aaPredicted RBP9.39□□□□□ -0.91
CMTM3-209ENST00000565003 RNF112Q9ULX5 631 aa9.39□□□□□ -0.91
CMTM3-209ENST00000565003 ANKDD1BA6NHY2 528 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 SUPT3HB4E1H0 165 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 CLGNO14967 610 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 B3GALT2O43825 422 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 CCNT2O60583 730 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 SUPT3HO75486 399 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 MYBL2P10244 700 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 TFEBP19484 476 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 TPP2P29144 1249 aaPredicted RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 PPP2R1BP30154 601 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 PER3P56645 1201 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 RAB38P57729 211 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 MLF1P58340 268 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 IRF9Q00978 393 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 GUCY2DQ02846 1103 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 NAB1Q13506 487 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 E2F2Q14209 437 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ZRSR2Q15696 482 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 UBAP2Q5T6F2 1119 aaKnown RBP9.38□□□□□ -0.91
CMTM3-209ENST00000565003 TRIM40Q6P9F5 258 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 ABHD17CQ6PCB6 329 aa9.38□□□□□ -0.91
CMTM3-209ENST00000565003 RAPH1Q70E73 1250 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms