RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MAOBP27338 520 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PTPN4P29074 926 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 AQP4P55087 323 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RPP30P78346 268 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 SELPLGQ14242 412 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FASTKQ14296 549 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 PLA1AQ53H76 456 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF529Q6P280 563 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PLA2G15Q8NCC3 412 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF740Q8NDX6 193 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NANOS1Q8WY41 292 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 CENPIQ92674 756 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 AP2M1Q96CW1 435 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF641Q96N77 438 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 PRR14Q9BWN1 585 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GPR174Q9BXC1 333 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GLOD4Q9HC38 313 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SERGEFQ9UGK8 458 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RAB26Q9ULW5 256 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC22A7Q9Y694 548 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PDCD5O14737 125 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MYL12BO14950 172 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KMOO15229 486 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 UNC5CO95185 931 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ALDOCP09972 364 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 HMGA1P17096 107 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 AP2S1P53680 142 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 LMAN2Q12907 356 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GPR176Q14439 515 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FGD2Q7Z6J4 655 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FAM86B1Q8N7N1 296 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF420Q8TAQ5 688 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 TESCQ96BS2 214 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RHNO1Q9BSD3 238 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ACTRT3Q9BYD9 372 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NSUN3Q9H649 340 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 XKR8Q9H6D3 395 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 EXOSC4Q9NPD3 245 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 GLTPQ9NZD2 209 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF282Q9UDV7 671 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 NXT1Q9UKK6 140 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 YIPF1Q9Y548 306 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DOCK9Q9BZ29 2069 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LOC110117498-PIK3R3F6TDL0 507 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 XKRYO14609 159 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GSC2O15499 205 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TCEA3O75764 348 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PEX11BO96011 259 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 XRCC1P18887 633 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 SHHQ15465 462 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PYCR3Q53H96 274 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SFT2D3Q587I9 215 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FBXL19Q6PCT2 694 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KRT77Q7Z794 578 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PTGR2Q8N8N7 351 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 PIK3R3Q92569 461 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MAL2Q969L2 176 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PKMYT1Q99640 499 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ATF6BQ99941 703 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 YIPF4Q9BSR8 244 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PCED1AQ9H1Q7 454 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MOCS1Q9NZB8 636 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SLC7A8Q9UHI5 535 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 VWA8A3KMH1 1905 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF840PA6NDX5 716 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RTCAO00442 366 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 NDUFS2O75306 463 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 AP2A2O94973 939 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 HMGA2P52926 109 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 UFM1P61960 85 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NPRL3Q12980 569 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TLR1Q15399 786 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LY6G5CQ5SRR4 150 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PDZK1Q5T2W1 519 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 HECTD2Q5U5R9 776 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KLHDC10Q6PID8 442 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 Q6ZVL8 140 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KCT2Q8NC54 265 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 HMGCLL1Q8TB92 370 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 BRIX1Q8TDN6 353 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 VRTNQ9H8Y1 702 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PCDH12Q9NPG4 1184 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 EMC3Q9P0I2 261 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF391Q9UJN7 358 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NBPF19A0A087WUL8 3843 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 A0A0G2JMP0 313 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ABHD14A-ACY1A0A1B0GW23 586 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PDZK1P1A8MUH7 402 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ABCB7O75027 752 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OAZ2O95190 189 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZIC2O95409 532 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 PRAMEF1O95521 474 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 AP2A1O95782 977 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FGF4P08620 206 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ANPEPP15144 967 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MPIP34949 423 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MC3RP41968 323 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CSNK1DP48730 415 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ABATP80404 500 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TRAP1Q12931 704 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms