RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ARSFP54793 590 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 NME5P56597 212 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 CLDN8P56748 225 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 C21orf58P58505 322 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RAB8AP61006 207 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RAE1P78406 368 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 BTN3A2P78410 334 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 ZFP36L1Q07352 338 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 RCAN2Q14206 197 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 HEPACAMQ14CZ8 416 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 FAM214AQ32MH5 1076 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 DEFB134Q4QY38 66 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 AGKQ53H12 422 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 PAOXQ6QHF9 649 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 ZNF574Q6ZN55 896 aaPredicted RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 TMPRSS9Q7Z410 1059 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RCBTB1Q8NDN9 531 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 CLHC1Q8NHS4 586 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RP9Q8TA86 221 aaKnown RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 MVB12AQ96EY5 273 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 CMKLR1Q99788 373 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 NDC1Q9BTX1 674 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 ZNF717Q9BY31 904 aaPredicted RBP12.18□□□□□ -0.46
CLK3-214ENST00000564096 SLC7A5P2Q9GIP4 190 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 KLHL31Q9H511 634 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 SYNPO2LQ9H987 977 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 WDR41Q9HAD4 459 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 MIEF1Q9NQG6 463 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 ATAD3AQ9NVI7 634 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 CCDC167Q9P0B6 97 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 TAGLN3Q9UI15 199 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 RALGAPA1Q6GYQ0 2036 aa12.18□□□□□ -0.46
CLK3-214ENST00000564096 OTOGLQ3ZCN5 2332 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 A0A0G2JN53 185 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 CAPN14A8MX76 684 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 ANGPT2O15123 496 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 SCAMP2O15127 329 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 GALR3O60755 368 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 EEDO75530 441 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 ATP5HO75947 161 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 KLHL18O94889 574 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 UBOX5O94941 541 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 FAM58BPP0C7Q3 252 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 COX7A2P14406 83 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 FOLR1P15328 257 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 IL1RNP18510 177 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 BUD31P41223 144 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 POLR2JP52435 117 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 TAS2R50P59544 299 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 KLC1Q07866 573 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 FOXM1Q08050 763 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 EIF3IQ13347 325 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 CYLC2Q14093 348 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 FAM53BQ14153 422 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 C6orf89Q6UWU4 347 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 ZNF793Q6ZN11 406 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 UBE3DQ7Z6J8 389 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 EFCAB3Q8N7B9 438 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 ACOT4Q8N9L9 421 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 DEFB124Q8NES8 71 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 C16orf78Q8WTQ4 265 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 TSPEARQ8WU66 669 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 TESCQ96BS2 214 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 ZNF501Q96CX3 271 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 MTERF3Q96E29 417 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 TEFMQ96QE5 360 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 SORBS1Q9BX66 1292 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 NPLQ9BXD5 320 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 CLMPQ9H6B4 373 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 CLK4Q9HAZ1 481 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 STARD5Q9NSY2 213 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 CUTCQ9NTM9 273 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 SIDT1Q9NXL6 827 aaKnown RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 CDC14AQ9UNH5 594 aa12.17□□□□□ -0.46
CLK3-214ENST00000564096 ARID1BQ8NFD5 2236 aaPredicted RBP12.17□□□□□ -0.46
CLK3-214ENST00000564096 CCDC154A6NI56 674 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 CFLARO15519 480 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 HCRTR1O43613 425 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 GFRA3O60609 400 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 NSA2O95478 260 aaKnown RBP12.16□□□□□ -0.46
CLK3-214ENST00000564096 GBAP04062 536 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 IL6P05231 212 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 SNRPB2P08579 225 aaKnown RBP12.16□□□□□ -0.46
CLK3-214ENST00000564096 IL3P08700 152 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 HBQ1P09105 142 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 NR2F6P10588 404 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 ESRRAP11474 423 aaPredicted RBP12.16□□□□□ -0.46
CLK3-214ENST00000564096 TACR1P25103 407 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 TLX1P31314 330 aaPredicted RBP12.16□□□□□ -0.46
CLK3-214ENST00000564096 KIR3DL1P43629 444 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 RASSF2P50749 326 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 PDX1P52945 283 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 RAB15P59190 212 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 UFM1P61960 85 aa12.16□□□□□ -0.46
CLK3-214ENST00000564096 INSM1Q01101 510 aaPredicted RBP12.16□□□□□ -0.46
CLK3-214ENST00000564096 STX5Q13190 355 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms