RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 VMP1Q96GC9 406 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 TXNDC15Q96J42 360 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 C12orf66Q96MD2 445 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 DPAGT1Q9H3H5 408 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 SLA2Q9H6Q3 261 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 TRPS1Q9UHF7 1281 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 PHF11Q9UIL8 331 aa12.15□□□□□ -0.46
COMMD4-209ENST00000564068 DAPL1A0PJW8 107 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 OR7A10O76100 309 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CKBP12277 381 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CDH11P55287 796 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CCL23P55773 120 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CARD16Q5EG05 197 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 RNF44Q7L0R7 432 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 NAGSQ8N159 534 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 PCNPQ8WW12 178 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 RHNO1Q9BSD3 238 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 HEBP1Q9NRV9 189 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 SCML2Q9UQR0 700 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 MEN1O00255 615 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CDK1P06493 297 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FAM163BP0C2L3 166 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CXCR2P25025 360 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 CSKP41240 450 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FBXW4P57775 412 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 NKX3-2P78367 333 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 RHAGQ02094 409 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 THOC6Q86W42 341 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 DENND6BQ8NEG7 585 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ATP6V1C2Q8NEY4 427 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FUBP3Q96I24 572 aaKnown RBP eCLIP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 GAL3ST1Q99999 423 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 OSER1Q9NX31 292 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FBXO9Q9UK97 447 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 C2orf92A0A1B0GVN3 265 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 FAM86C2PA6NEL3 165 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 HMX3A6NHT5 357 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 TARM1B6A8C7 271 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ATG13O75143 517 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 PTHP01270 115 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 RPLP2P05387 115 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ADRA1AP35348 466 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 AVPR1BP47901 424 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 RPS26P62854 115 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 NFATC2Q13469 925 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 GNA13Q14344 377 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ANKRD54Q6NXT1 300 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 PRSS55Q6UWB4 352 aaPredicted RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 SHFQ7M4L6 423 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 NPLOC4Q8TAT6 608 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 LRR1Q96L50 414 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 GTPBP2Q9BX10 602 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 MKRN2Q9H000 416 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ARNT2Q9HBZ2 717 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ZDHHC3Q9NYG2 299 aa12.14□□□□□ -0.47
COMMD4-209ENST00000564068 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
COMMD4-209ENST00000564068 NUPL2O15504 423 aaKnown RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 EEF1E1O43324 174 aaKnown RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ELFN1P0C7U0 828 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 DNASE1P24855 282 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 NUP62P37198 522 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 PSMD8P48556 350 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 MEF2AQ02078 507 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 PRKCZQ05513 592 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ZMYND11Q15326 602 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 SYT6Q5T7P8 510 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TMEM220Q6QAJ8 160 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 IQCHQ86VS3 1027 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 BEND7Q8N7W2 519 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 DUS3LQ96G46 650 aaKnown RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 MBD2Q9UBB5 411 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 MTHFD2P13995 350 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 TACR1P25103 407 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 DGKGP49619 791 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 HNMTP50135 292 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ADGRF1Q5T601 910 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 KLHL36Q8N4N3 616 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 YIPF7Q8N8F6 280 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 PIGXQ8TBF5 258 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ZBED3Q96IU2 234 aaPredicted RBP12.13□□□□□ -0.47
COMMD4-209ENST00000564068 SUSD3Q96L08 255 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 SNX18Q96RF0 628 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 NELL2Q99435 816 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 PIP5K1AQ99755 562 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 STUB1Q9UNE7 303 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ITM2BQ9Y287 266 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 LRP5O75197 1615 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 M0R233 179 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 QSOX1O00391 747 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ICMTO60725 284 aa12.13□□□□□ -0.47
COMMD4-209ENST00000564068 ITGAMP11215 1152 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms