RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 ZNF740Q8NDX6 193 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 ZNF548Q8NEK5 533 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 CLHC1Q8NHS4 586 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 LMX1AQ8TE12 382 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 WDR60Q8WVS4 1066 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 GTF2H4Q92759 462 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 ZNF764Q96H86 408 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 GBP5Q96PP8 586 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 KCNC2Q96PR1 638 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 EBPLQ9BY08 206 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 BHLHE41Q9C0J9 482 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 ROGDIQ9GZN7 287 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 REXO4Q9GZR2 422 aaKnown RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 SPNS1Q9H2V7 528 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 OR51B5Q9H339 312 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 TCEAL2Q9H3H9 227 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 REEP4Q9H6H4 257 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 SLC6A20Q9NP91 592 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 MIEF1Q9NQG6 463 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 ACTR10Q9NZ32 417 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 STOML1Q9UBI4 398 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 CORO2BQ9UQ03 480 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 INVSQ9Y283 1065 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 CSNK1G3Q9Y6M4 447 aa9.26□□□□□ -0.93
UBFD1-202ENST00000563366 SNRNP200O75643 2136 aaKnown RBP9.26□□□□□ -0.93
UBFD1-202ENST00000563366 MDC1Q14676 2089 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 IGKV1-8A0A0C4DH67 115 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 A0A0J9YY10 115 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TMEM238LA0A1B0GVL6 79 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 FEZF1A0PJY2 475 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR2A25A4D2G3 310 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR6C74A6NCV1 312 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR5K3A6NET4 321 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 BTN3A3O00478 584 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 RNASET2O00584 256 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 NME4O00746 187 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PLPP1O14494 284 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 RFXANKO14593 260 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 DFNA5O60443 496 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TBX19O60806 448 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 GMNNO75496 209 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 BCAS2O75934 225 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CD1EP15812 388 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 UGT2B7P16662 529 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 HOXB6P17509 224 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 BCKDHBP21953 392 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PEBP1P30086 187 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CNR2P34972 360 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 HOXD12P35452 270 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 GRIA3P42263 894 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 SSR2P43308 183 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 DGKQP52824 942 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 MAPK12P53778 367 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 RAE1P78406 368 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TCEA2Q15560 299 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 HKDC1Q2TB90 917 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 ADPRMQ3LIE5 342 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 MANEAQ5SRI9 462 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PERM1Q5SV97 790 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CCNYL2Q5T2Q4 361 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 LRIF1Q5T3J3 769 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CPTPQ5TA50 214 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 KIAA1614Q5VZ46 1190 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 ADNP2Q6IQ32 1131 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 NANOGP8Q6NSW7 305 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 ARMCX6Q7L4S7 300 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 VN1R5Q7Z5H4 357 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PAQR7Q86WK9 346 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 SLC15A3Q8IY34 581 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 FBXL6Q8N531 539 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TRIML2Q8N7C3 387 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR2L5Q8NG80 312 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR10G6Q8NH81 332 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CDC26Q8NHZ8 85 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 DNAJB14Q8TBM8 379 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 GAB3Q8WWW8 586 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PPCDCQ96CD2 204 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 LRGUKQ96M69 825 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 ANKRD27Q96NW4 1050 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 OR2A14Q96R47 310 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CGREF1Q99674 301 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 MDFIQ99750 246 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TBCDQ9BTW9 1192 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 DUSP26Q9BV47 211 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 NLNQ9BYT8 704 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 EPB41L1Q9H4G0 881 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 NANOGQ9H9S0 305 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 IL1RL2Q9HB29 575 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 HRASLS2Q9NWW9 162 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 SPHK1Q9NYA1 384 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 STX18Q9P2W9 335 aaKnown RBP9.25□□□□□ -0.93
UBFD1-202ENST00000563366 CD300AQ9UGN4 299 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 ATP6V1HQ9UI12 483 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 BTNL2Q9UIR0 455 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 FBXO4Q9UKT5 387 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PCDHGB4Q9UN71 923 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 PCDHA9Q9Y5H5 950 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 SPAG17Q6Q759 2223 aa9.25□□□□□ -0.93
UBFD1-202ENST00000563366 TMEM131Q92545 1883 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms