RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 WTIPA6NIX2 430 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 HEPACAM2A8MVW5 462 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 KLRF2D3W0D1 207 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LRRN3E7EW58 273 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ACOT7O00154 380 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 C4BPAP04003 597 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 SPATA31C1P0DKV0 1188 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CBR1P16152 277 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 GSTM3P21266 225 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 GNA11P29992 359 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 HOXA7P31268 230 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 ACADVLP49748 655 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NDUFV1P49821 464 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 AP3S2P59780 193 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NHLH1Q02575 133 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NAE1Q13564 534 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NKAIN2Q5VXU1 208 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ABHD15Q6UXT9 468 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZNF554Q86TJ5 538 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TRABD2AQ86V40 505 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NME9Q86XW9 330 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SIAH3Q8IW03 269 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 DCP1BQ8IZD4 617 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 STXBP6Q8NFX7 210 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SPPL2AQ8TCT8 520 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NSMCE1Q8WV22 266 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NTAN1Q96AB6 310 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PPP1R16AQ96I34 528 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 C10orf90Q96M02 699 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SLC22A4Q9H015 551 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 LRRN3Q9H3W5 708 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ANKZF1Q9H8Y5 726 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 BARX1Q9HBU1 254 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 C19orf12Q9NSK7 152 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 IMPACTQ9P2X3 320 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 UPB1Q9UBR1 384 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CMAHPQ9Y471 501 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ATG4BQ9Y4P1 393 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 GMPPBQ9Y5P6 360 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ACTL7AQ9Y615 435 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZFYVE9O95405 1425 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 A0A0A6YYH2 397 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 A0A0G2JLW4 131 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 C13orf42A0A1B0GVH6 325 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 A6NJ64 397 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SYCE1LA8MT33 242 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 A8MUI8 341 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NPIPA7E9PJI5 369 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PPP6CO00743 305 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TRAFD1O14545 582 aaPredicted RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 PPM1DO15297 605 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CHMP2AO43633 222 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PFDN1O60925 122 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NKX2-2O95096 273 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NXPH2O95156 264 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 CA3P07451 260 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 GRPP07492 148 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FTH1P19P0C7X4 201 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 NPIPA8P0DM63 369 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SYT1P21579 422 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 SLC6A6P31641 620 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 YWHABP31946 246 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 AVPR1AP37288 418 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PRCPP42785 496 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PPP3CCP48454 512 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 WNT3AP56704 352 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ITGADQ13349 1161 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 EXOC3L4Q17RC7 722 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ADPRMQ3LIE5 342 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ZNF691Q5VV52 312 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 UQCC3Q6UW78 93 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 C3orf62Q6ZUJ4 267 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 RRM2BQ7LG56 351 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FBXO39Q8N4B4 442 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ALLCQ8N6M5 410 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 OR4C15Q8NGM1 316 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 MCHR2Q969V1 340 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PHF21AQ96BD5 680 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 TMEM175Q9BSA9 504 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 FEM1AQ9BSK4 669 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 MRPL13Q9BYD1 178 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 MAGEF1Q9HAY2 307 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 PCMTD2Q9NV79 361 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 MTMR10Q9NXD2 777 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 ADA2Q9NZK5 511 aa4.56□□□□□ -1.68
SMG1-207ENST00000563235 EIF3KQ9UBQ5 218 aaKnown RBP4.56□□□□□ -1.68
SMG1-207ENST00000563235 CPSF1Q10570 1443 aaKnown RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 LOC105369274A0A096LPK9 316 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LOC102723532A0A0G2JNH3 316 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 NPHP3-ACAD11A0A0J9YXS1 232 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 A0A1W2PQ27 194 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 A0A1W2PQ64 194 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 A0A1W2PQC6 194 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 KIAA1324LA8MWY0 1029 aaPredicted RBP4.55□□□□□ -1.68
SMG1-207ENST00000563235 C9orf172C9J069 976 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 MCIDASD6RGH6 385 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 E7ESA3 106 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 NPIPB8E9PQR5 432 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 LAD1O00515 517 aa4.55□□□□□ -1.68
SMG1-207ENST00000563235 SIVA1O15304 175 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms