RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 KLHL18O94889 574 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 BMP10O95393 424 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 TAC1P20366 129 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 IMPDH1P20839 514 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 FBLP22087 321 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MMP11P24347 488 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 HNRNPH1P31943 449 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 FOLR3P41439 243 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 EFNA3P52797 238 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MAT1AQ00266 395 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 OCA2Q04671 838 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 KLC1Q07866 573 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SYT16Q17RD7 645 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CCDC153Q494R4 210 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 GGTA1PQ4G0N0 100 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 DEFB134Q4QY38 66 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 UNC50Q53HI1 259 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF678Q5SXM1 525 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 NIPAL1Q6NVV3 410 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MED27Q6P2C8 311 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZYG11AQ6WRX3 759 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PPP1R32Q7Z5V6 425 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SLC22A9Q8IVM8 553 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 APLFQ8IW19 511 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZC3H7AQ8IWR0 971 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 C4orf33Q8N1A6 199 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZCCHC10Q8TBK6 192 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 WDR20Q8TBZ3 569 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 EXTL1Q92935 676 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZIM3Q96PE6 472 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 BBC3Q96PG8 261 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 TMEM237Q96Q45 408 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 UBL7Q96S82 380 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MS4A8Q9BY19 250 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ACTR8Q9H981 624 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 C14orf105Q9NVL8 296 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 TRPC4Q9UBN4 977 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PPT2Q9UMR5 302 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 RNF11Q9Y3C5 154 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 NAALAD2Q9Y3Q0 740 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ANGPTL3Q9Y5C1 460 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 NBEAQ8NFP9 2946 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 COPEO14579 308 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 FFAR3O14843 346 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 GPR42O15529 346 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 DNAJB6O75190 326 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CLDN9O95484 217 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 B3GALT4O96024 378 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SERPIND1P05546 499 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CYC1P08574 325 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF888P0CJ79 500 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CREB1P16220 341 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SERPINB1P30740 379 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PIK3CBP42338 1070 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CDH13P55290 713 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 RAB8AP61006 207 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 STXBP1P61764 594 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CLCQ05315 142 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SRSF11Q05519 484 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 HIST2H2ACQ16777 129 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 DEFB109BQ30KR1 87 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SAMD5Q5TGI4 173 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 HIST2H2AA3Q6FI13 130 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ABHD17CQ6PCB6 329 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 BORAQ6PGQ7 559 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 RPS27LQ71UM5 84 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ABHD13Q7L211 337 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MRGPREQ86SM8 312 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 RAB43Q86YS6 212 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 OR2L5Q8NG80 312 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 OR5T3Q8NGG3 340 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 OR51Q1Q8NH59 317 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 HUS1BQ8NHY5 278 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 RDH11Q8TC12 318 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 GAL3ST3Q96A11 431 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 MIEF2Q96C03 454 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CCDC126Q96EE4 140 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 APOPT1Q96IL0 206 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 QRFPRQ96P65 431 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 IP6K3Q96PC2 410 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 REXO4Q9GZR2 422 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 C12orf65Q9H3J6 166 aaKnown RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SOX17Q9H6I2 414 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SEMA4BQ9NPR2 832 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PRDM7Q9NQW5 492 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SEMA3GQ9NS98 782 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PSD3Q9NYI0 1048 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ADGRE2Q9UHX3 823 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PLLPQ9Y342 182 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 HS3ST3B1Q9Y662 390 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CCDC88CQ9P219 2028 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 CHD6Q8TD26 2715 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 FAM208BQ5VWN6 2430 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 IDSB3KWA1 339 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 FOXE1O00358 373 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 SOCS6O14544 535 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 ERI3O43414 337 aaKnown RBP5.84□□□□□ -1.47
CNOT1-204ENST00000563130 TYROBPO43914 113 aa5.84□□□□□ -1.47
CNOT1-204ENST00000563130 RDH16O75452 317 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms