RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 NEU2Q9Y3R4 380 aa11.05□□□□□ -0.64
CARMIL3-204ENST00000561354 SAR1BQ9Y6B6 198 aa11.05□□□□□ -0.64
CARMIL3-204ENST00000561354 DCHS2Q6V1P9 2916 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CTAGE15A4D2H0 777 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 PABPN1LA6NDY0 278 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 PSMD12O00232 456 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 RRP9O43818 475 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 HS6ST1O60243 411 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 ENO2P09104 434 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CTAGE8P0CG41 777 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 RNH1P13489 461 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CD1EP15812 388 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 TCP1P17987 556 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 GABRB3P28472 473 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CHRNB4P30926 498 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CXCR5P32302 372 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CLCN2P51788 898 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CDKN2DP55273 166 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 IL2P60568 153 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 TFF3Q07654 80 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 HYAL2Q12891 473 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CEP128Q6ZU80 1094 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CTAGE6Q86UF2 777 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CTAGE4Q8IX94 777 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 CYP4Z2PQ8N1L4 340 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 TMEM156Q8N614 296 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 NAT8LQ8N9F0 302 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 TRPV3Q8NET8 790 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 B3GNT7Q8NFL0 401 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 RND1Q92730 232 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 NEIL2Q969S2 332 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 MAGOHBQ96A72 148 aaKnown RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 SPNS1Q9H2V7 528 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 NECTIN3Q9NQS3 549 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 ZFATQ9P243 1243 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 RNF6Q9Y252 685 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 MMACHCQ9Y4U1 282 aa11.04□□□□□ -0.64
CARMIL3-204ENST00000561354 TRBV11-1A0A0K0K1C0 115 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 CDC40O60508 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 ITGA10O75578 1167 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 TOXO94900 526 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 AHSGP02765 367 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 SERPINA6P08185 405 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 PGAM1P18669 254 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 RFC3P40938 356 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 GPR143P51810 404 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 RAB8AP61006 207 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 REEP5Q00765 189 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 CRYMQ14894 314 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 CYP1B1Q16678 543 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 RBM20Q5T481 1227 aaKnown RBP11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 MDGA2Q7Z553 956 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 GALNT7Q86SF2 657 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 CNTN4Q8IWV2 1026 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 DMRTC2Q8IXT2 367 aaPredicted RBP11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 RASGEF1CQ8N431 466 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 ANKRD53Q8N9V6 530 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 VMP1Q96GC9 406 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 KCNJ16Q9NPI9 418 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 TIMMDC1Q9NPL8 285 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 KCNN3Q9UGI6 736 aa11.03□□□□□ -0.64
CARMIL3-204ENST00000561354 HCFC1P51610 2035 aa11.02□□□□□ -0.64
CARMIL3-204ENST00000561354 CELSR1Q9NYQ6 3014 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 NKX2-6A6NCS4 301 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 A8MUA0 341 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 MYO1DO94832 1006 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 TTC4O95801 387 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 HOXD4P09016 255 aaPredicted RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 MSX1P28360 303 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 HNF4AP41235 474 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 GPR85P60893 370 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 PDAP1Q13442 181 aaKnown RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 ERCC6LQ2NKX8 1250 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 BBS9Q3SYG4 887 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 EMC4Q5J8M3 183 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 CCDC137Q6PK04 289 aaKnown RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 NXPE4Q6UWF7 544 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 RGS9BPQ6ZS82 235 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 ACAD11Q709F0 780 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 ZNF572Q7Z3I7 529 aaPredicted RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 GPALPP1Q8IXQ4 340 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 CA13Q8N1Q1 262 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 GPATCH11Q8N954 259 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 OR52N2Q8NGI0 321 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 CREB3L4Q8TEY5 395 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 PDLIM5Q96HC4 596 aaKnown RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 UCK2Q9BZX2 261 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 RHBGQ9H310 441 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 KLHL31Q9H511 634 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 SLC24A3Q9HC58 644 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 ZNF223Q9UK11 482 aaPredicted RBP11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 FBXW2Q9UKT8 454 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 SNX12Q9UMY4 172 aa11.02□□□□□ -0.65
CARMIL3-204ENST00000561354 YARS2Q9Y2Z4 477 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms