RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 PPM1MQ96MI6 270 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 FAIM2Q9BWQ8 316 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CADM1Q9BY67 442 aaKnown RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 SLC52A3Q9NQ40 469 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 MIEF1Q9NQG6 463 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 PRDM7Q9NQW5 492 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 FAM120CQ9NX05 1096 aaKnown RBP9.81□□□□□ -0.84
USP3-219ENST00000561326 SOHLH2Q9NX45 425 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 SH3BP4Q9P0V3 963 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 ATP6V1HQ9UI12 483 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 PCDHGB4Q9UN71 923 aa9.81□□□□□ -0.84
USP3-219ENST00000561326 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 WDR87Q6ZQQ6 2873 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 LOC105369274A0A096LPK9 316 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 C15orf38-AP3S2A0A0A6YYH1 394 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 IGHV5-51A0A0C4DH38 117 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 LOC102723532A0A0G2JNH3 316 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 C9JVG2 144 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 RTCAO00442 366 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 FLRT2O43155 660 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 B3GALT2O43825 422 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ERN1O75460 977 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 CIB2O75838 187 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ANP32DO95626 131 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 CPNE6O95741 557 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 FAM58BPP0C7Q3 252 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ZNF888P0CJ79 500 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 SMIM10L1P0DMW3 83 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 MYF5P13349 255 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 CD1EP15812 388 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ATP5A1P25705 553 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 ZFP36L2P47974 494 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 TRPC1P48995 793 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 MTTPP55157 894 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 GFERP55789 205 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 VSX2P58304 361 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 PSME3P61289 254 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 KCNJ2P63252 427 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 KLC1Q07866 573 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SLC14A1Q13336 389 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 TRMT5Q32P41 509 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 SPATS1Q496A3 300 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SPANXN4Q5MJ08 99 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 WASHC2DQ5SRD0 308 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 FRMPD2BQ6IN97 320 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 FAM71E1Q6IPT2 247 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 GUSBP11Q6P575 273 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 TMEM71Q6P5X7 295 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 BNC2Q6ZN30 1099 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 DBX2Q6ZNG2 339 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 VN1R4Q7Z5H5 301 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 CAMKMTQ7Z624 323 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 UBE3DQ7Z6J8 389 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ARPINQ7Z6K5 226 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 OR4N4Q8N0Y3 316 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ZCCHC7Q8N3Z6 543 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 ACOT4Q8N9L9 421 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 KCT2Q8NC54 265 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 FBXO27Q8NI29 283 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.8□□□□□ -0.84
USP3-219ENST00000561326 UTP15Q8TED0 518 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 PPCDCQ96CD2 204 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 TM4SF18Q96CE8 201 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SMIM10Q96HG1 83 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 FCRL4Q96PJ5 515 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SERINC2Q96SA4 455 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 CDRT15Q96T59 188 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SH3GL1Q99961 368 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 MACROD1Q9BQ69 325 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 DUSP26Q9BV47 211 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 BHLHE41Q9C0J9 482 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 KLHL31Q9H511 634 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 IL1RL2Q9HB29 575 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 MS4A12Q9NXJ0 267 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 ADA2Q9NZK5 511 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 MAP10Q9P2G4 905 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 KLHL3Q9UH77 587 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 BCAP29Q9UHQ4 241 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 PSME2Q9UL46 239 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 AP3M1Q9Y2T2 418 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SLC22A7Q9Y694 548 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 SPACA6W5XKT8 324 aa9.8□□□□□ -0.84
USP3-219ENST00000561326 MN1Q10571 1320 aaPredicted RBP9.8□□□□□ -0.84
USP3-219ENST00000561326 A0A0A6YYD5 115 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 A0A0G2JN53 185 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 PRSS51A0A1B0GVH4 220 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 KIF1CO43896 1103 aaKnown RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 TBX19O60806 448 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 PRAMEF10O60809 474 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 STATHP02808 62 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 IL3P08700 152 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 FURINP09958 794 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 CKMT2P17540 419 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 ALOX12P18054 663 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 DDCP20711 480 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 TLX1P31314 330 aaPredicted RBP9.79□□□□□ -0.84
USP3-219ENST00000561326 ALDH9A1P49189 494 aa9.79□□□□□ -0.84
USP3-219ENST00000561326 RAB8AP61006 207 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms