RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 ETHE1O95571 254 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 PTX3P26022 381 aaPredicted RBP19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 HPDP32754 393 aaPredicted RBP19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 XCR1P46094 333 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 EFNA3P52797 238 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 PKNOX1P55347 436 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 NAA20P61599 178 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 SKP1P63208 163 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 TBR1Q16650 682 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 TMEM35AQ53FP2 167 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 SGO1Q5FBB7 561 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 CFAP157Q5JU67 520 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 TRIM40Q6P9F5 258 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 HDXQ7Z353 690 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 CDYL2Q8N8U2 506 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 AGAP11Q8TF27 550 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 TLCD1Q96CP7 247 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 PEX11GQ96HA9 241 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 CATSPER2Q96P56 530 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 KCNK9Q9NPC2 374 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 FARSBQ9NSD9 589 aaKnown RBP19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 C14orf105Q9NVL8 296 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 ATMQ13315 3056 aa19.17■□□□□ 0.66
TSPAN3-207ENST00000559494 PCSK5Q92824 1860 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 RTCAO00442 366 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 ESRRBO95718 433 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 BPGMP07738 259 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 MMP11P24347 488 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 EMP2P54851 167 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 PHEXP78562 749 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 IFT88Q13099 833 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 TCHHL1Q5QJ38 904 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 ZNF793Q6ZN11 406 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 PPP1R32Q7Z5V6 425 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 CA13Q8N1Q1 262 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 SRFBP1Q8NEF9 429 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 THAP4Q8WY91 577 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 ARL8AQ96BM9 186 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 MESP1Q9BRJ9 268 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 CRB3Q9BUF7 120 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 STMN4Q9H169 189 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 MID1IP1Q9NPA3 183 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 C3orf18Q9UK00 162 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 PPT2Q9UMR5 302 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 SNX6Q9UNH7 406 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 POLHQ9Y253 713 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 STK38LQ9Y2H1 464 aa19.16■□□□□ 0.66
TSPAN3-207ENST00000559494 OR2W5A6NFC9 320 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 GOLGA6L10A6NI86 522 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 MANBAO00462 879 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 PDYNP01213 254 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 ATP5A1P25705 553 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 TGM3Q08188 693 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 CUL3Q13618 768 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 RAB43Q86YS6 212 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 METTL6Q8TCB7 284 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 TTC9Q92623 222 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 EXTL1Q92935 676 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 RGMAQ96B86 450 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 CNDP1Q96KN2 507 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 KCNC2Q96PR1 638 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 KCNA7Q96RP8 456 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 SERINC2Q96SA4 455 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 TBCDQ9BTW9 1192 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 SORBS1Q9BX66 1292 aaKnown RBP19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 NPLQ9BXD5 320 aaPredicted RBP19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 SLC29A3Q9BZD2 475 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 ELOVL6Q9H5J4 265 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 TNFRSF12AQ9NP84 129 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 LANCL2Q9NS86 450 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 SEMA3GQ9NS98 782 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 MKL2Q9ULH7 1088 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 TIMM22Q9Y584 194 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 HS3ST3B1Q9Y662 390 aa19.15■□□□□ 0.66
TSPAN3-207ENST00000559494 PIEZO2Q9H5I5 2752 aa19.14■□□□□ 0.66
TSPAN3-207ENST00000559494 IDSB3KWA1 339 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 FAM227AF5H4B4 570 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 PLPP1O14494 284 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 TM9SF1O15321 606 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 IGHEP01854 428 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 ITGB2P05107 769 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 ENO1P06733 434 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 HEXBP07686 556 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 DHRS4L1P0CG22 281 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 IL10P22301 178 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 CERS1P27544 350 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 SERPINB4P48594 390 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 MTTPP55157 894 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 FOXA1P55317 472 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 MAGOHP61326 146 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 RHDQ02161 417 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 ASPHQ12797 758 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 ATP1A4Q13733 1029 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 AP5B1Q2VPB7 878 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 LINC00303Q3SY05 128 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 C10orf62Q5T681 223 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 OR4C11Q6IEV9 310 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 MRGPREQ86SM8 312 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 ACOT4Q8N9L9 421 aa19.14■□□□□ 0.65
TSPAN3-207ENST00000559494 OR6Y1Q8NGX8 325 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms