RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 PIEZO1Q92508 2521 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 TRBC2A0A5B9 178 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CFLARO15519 480 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 SORBS2O94875 1100 aaKnown RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 PCNAP12004 261 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 SDC1P18827 310 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 HNRNPH1P31943 449 aaKnown RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 GRK3P35626 688 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 FOXM1Q08050 763 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 DDX39BQ13838 428 aaKnown RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 CEACAM7Q14002 265 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 KCNAB1Q14722 419 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 SNCBQ16143 134 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 NOXRED1Q6NXP6 359 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 RIPOR1Q6ZS17 1223 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CACTIN-AS1Q8N1I8 211 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 KRT78Q8N1N4 520 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 DPP10Q8N608 796 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 EFCAB3Q8N7B9 438 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CHTF18Q8WVB6 975 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 OR2A5Q96R48 311 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 ZBTB18Q99592 522 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 HOPXQ9BPY8 73 aaPredicted RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 DPY30Q9C005 99 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 PITHD1Q9GZP4 211 aaPredicted RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 RHBGQ9H310 441 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 DMRT3Q9NQL9 472 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 SOHLH2Q9NX45 425 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 TMEM181Q9P2C4 612 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 CLCA2Q9UQC9 943 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 POMPQ9Y244 141 aa15.76■□□□□ 0.11
TPM1-219ENST00000559397 RUVBL1Q9Y265 456 aaKnown RBP15.76■□□□□ 0.11
TPM1-219ENST00000559397 NPPAP01160 153 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 MSL3P1P0C860 447 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 TACR1P25103 407 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 BCL6P41182 706 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 MLLT3P42568 568 aaPredicted RBP15.75■□□□□ 0.11
TPM1-219ENST00000559397 RPS15AP62244 130 aaKnown RBP15.75■□□□□ 0.11
TPM1-219ENST00000559397 RPS13P62277 151 aaKnown RBP15.75■□□□□ 0.11
TPM1-219ENST00000559397 TIGD2Q4W5G0 525 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 PAGE3Q5JUK9 113 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 TMIGD1Q6UXZ0 262 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 VN1R5Q7Z5H4 357 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 PACS2Q86VP3 889 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 ANKRD53Q8N9V6 530 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 MFSD9Q8NBP5 474 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 ADAMTS14Q8WXS8 1223 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 DEPDC7Q96QD5 511 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 ZFYVE21Q9BQ24 234 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 GID8Q9NWU2 228 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 SIDT1Q9NXL6 827 aaKnown RBP15.75■□□□□ 0.11
TPM1-219ENST00000559397 PCDHGA4Q9Y5G9 962 aa15.75■□□□□ 0.11
TPM1-219ENST00000559397 A0A0J9YVX5 310 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 TMX2-CTNND1H3BSU7 103 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 OR1F1O43749 312 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 CSO75390 466 aaKnown RBP15.74■□□□□ 0.11
TPM1-219ENST00000559397 FOLR1P15328 257 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 ARL4DP49703 201 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 C21orf58P58505 322 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 CYP4F3Q08477 520 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
TPM1-219ENST00000559397 ZC3H12BQ5HYM0 836 aaKnown RBP15.74■□□□□ 0.11
TPM1-219ENST00000559397 C1orf146Q5VVC0 180 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 FRMPD2BQ6IN97 320 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 PRMT9Q6P2P2 845 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 GALNT18Q6P9A2 607 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 RIMKLAQ8IXN7 391 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 LRRC58Q96CX6 371 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 SPAG4Q9NPE6 437 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 NMRK1Q9NWW6 199 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 ABCD2Q9UBJ2 740 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 ADGRE2Q9UHX3 823 aa15.74■□□□□ 0.11
TPM1-219ENST00000559397 PTPRBP23467 1997 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 MAP3K7O43318 606 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 PRMT3O60678 531 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 IL6P05231 212 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CTSBP07858 339 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 ME2P23368 584 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 DGKQP52824 942 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CLNS1AP54105 237 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 RAE1P78406 368 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 ACSM2AQ08AH3 577 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 DEFB110Q30KQ9 67 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 SPIN4Q56A73 249 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 TMTC4Q5T4D3 741 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 ACSM2BQ68CK6 577 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 VN1R4Q7Z5H5 301 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 MCATQ8IVS2 390 aaKnown RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM1-219ENST00000559397 KRTCAP2Q8N6L1 136 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 AGBL5Q8NDL9 886 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 NUDT8Q8WV74 236 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 THAP11Q96EK4 314 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 LIN37Q96GY3 246 aaPredicted RBP15.73■□□□□ 0.11
TPM1-219ENST00000559397 ZNF285Q96NJ3 590 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 RNPEPL1Q9HAU8 725 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 OCIAD1Q9NX40 245 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 CD300AQ9UGN4 299 aa15.73■□□□□ 0.11
TPM1-219ENST00000559397 KIF26BQ2KJY2 2108 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms