RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 B4GALT2O60909 372 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 JRKO75564 520 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 WISP1O95388 367 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CLDN9O95484 217 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 OTCP00480 354 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TGFB1P01137 390 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PDGFAP04085 211 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PRR35P0CG20 571 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 COX6A1P12074 109 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 MTHFD2P13995 350 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 KRT15P19012 456 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PTX3P26022 381 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 TNFRSF8P28908 595 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 EEF1DP29692 281 aaKnown RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 PIK3CBP42338 1070 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CASP2P42575 452 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SSR2P43308 183 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CCT5P48643 541 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CCNG1P51959 295 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 RAP1GDS1P52306 607 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 MTTPP55157 894 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 MLLT10P55197 1068 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 HSD17B7P56937 341 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 OR4D2P58180 307 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 EEF1A2Q05639 463 aaKnown RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 PCDH1Q08174 1060 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 IFFO1Q0D2I5 559 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 STX4Q12846 297 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 DLG1Q12959 904 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 IFT88Q13099 833 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SLC13A2Q13183 592 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 MFAP5Q13361 173 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 GTF2H2Q13888 395 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 NAA30Q147X3 362 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 CPSF6Q16630 551 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNX1-205ENST00000559339 AP5B1Q2VPB7 878 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 NADK2Q4G0N4 442 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SFT2D3Q587I9 215 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 KHDRBS2Q5VWX1 349 aaKnown RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 SLC6A19Q695T7 634 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PLAG1Q6DJT9 500 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TTC19Q6DKK2 380 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 GRHL2Q6ISB3 625 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 GTF2H2CQ6P1K8 395 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ADGRD1Q6QNK2 874 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TMEM205Q6UW68 189 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TIFABQ6ZNK6 161 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 QSOX2Q6ZRP7 698 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 LINC00696Q6ZRV3 163 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 GOLGA7Q7Z5G4 137 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PDSS2Q86YH6 399 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SLC22A9Q8IVM8 553 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CYP4X1Q8N118 509 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SLC5A8Q8N695 610 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 HORMAD2Q8N7B1 307 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PLPP5Q8NEB5 264 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 OR7G3Q8NG95 312 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 OR5T3Q8NGG3 340 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 DNAJB14Q8TBM8 379 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 M1APQ8TC57 530 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CPT1CQ8TCG5 803 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ACMSDQ8TDX5 336 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 DCAKDQ8WVC6 231 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ISL2Q96A47 359 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 MS4A6EQ96DS6 147 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CCDC126Q96EE4 140 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PTCHD1Q96NR3 888 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SERINC2Q96SA4 455 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 WDR77Q9BQA1 342 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 TBCDQ9BTW9 1192 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 RBCK1Q9BYM8 510 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SLC29A3Q9BZD2 475 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TRIM4Q9C037 500 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.12□□□□□ -1.75
SNX1-205ENST00000559339 ZNF700Q9H0M5 742 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 SPNS1Q9H2V7 528 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 RHBGQ9H310 441 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ELOVL6Q9H5J4 265 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 CLMPQ9H6B4 373 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 NOL11Q9H8H0 719 aaKnown RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 PRDM9Q9NQV7 894 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 NMRK1Q9NWW6 199 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 STMN3Q9NZ72 180 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 AHSPQ9NZD4 102 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 XPR1Q9UBH6 696 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 TBK1Q9UHD2 729 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 DCDC2Q9UHG0 476 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 ZNF490Q9ULM2 529 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 MMACHCQ9Y4U1 282 aa4.12□□□□□ -1.75
SNX1-205ENST00000559339 RP1L1Q8IWN7 2480 aaPredicted RBP4.12□□□□□ -1.75
SNX1-205ENST00000559339 TRAV17A0A0B4J275 112 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 IGHV3-20A0A0C4DH32 117 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 OR2W5A6NFC9 320 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 ESPNB1AK53 854 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 MASP2O00187 686 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 FOXE1O00358 373 aaPredicted RBP4.11□□□□□ -1.75
SNX1-205ENST00000559339 E2F3O00716 465 aa4.11□□□□□ -1.75
SNX1-205ENST00000559339 CDK2AP1O14519 115 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms