RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 CATSPEREQ5SY80 951 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SFRP5Q5T4F7 317 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 GRTP1Q5TC63 336 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ASB18Q6ZVZ8 466 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MED25Q71SY5 747 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CMC1Q7Z7K0 106 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD163Q86VB7 1156 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 THOC6Q86W42 341 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KLHDC8AQ8IYD2 350 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRSS58Q8IYP2 241 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MFSD9Q8NBP5 474 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF740Q8NDX6 193 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 FDCSPQ8NFU4 85 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR4K1Q8NGD4 311 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 STT3BQ8TCJ2 826 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TM4SF19Q96DZ7 209 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MVB12AQ96EY5 273 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MMABQ96EY8 250 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 UBXN10Q96LJ8 280 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TSNARE1Q96NA8 513 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 IP6K3Q96PC2 410 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 EGFL8Q99944 293 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TMEM79Q9BSE2 394 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SARGQ9BW04 601 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 NUDT9Q9BW91 350 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SSBP4Q9BWG4 385 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 FAM129AQ9BZQ8 928 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRIM4Q9C037 500 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 DRC3Q9H069 523 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CDC42EP4Q9H3Q1 356 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ACSS2Q9NR19 701 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF282Q9UDV7 671 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 NXT1Q9UKK6 140 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC22A14Q9Y267 594 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SETXQ7Z333 2677 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 USP9XQ93008 2570 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 PTPN13Q12923 2485 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 hCG_2014768A0A024R1R8 64 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRBC2A0A5B9 178 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 NCF1BA6NI72 391 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 A6NL46 340 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 NCF1CA8MVU1 366 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 J3QKU1 62 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 AGPSO00116 658 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 TAPBPO15533 448 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ALOX12BO75342 701 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZGLP1P0C6A0 271 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 NCF1P14598 390 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 IL1RNP18510 177 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 GDF5P43026 501 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 KCNC1P48547 511 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 HNMTP50135 292 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ATP6V0D1P61421 351 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 MAT1AQ00266 395 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 REEP5Q00765 189 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 RAPSNQ13702 412 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 BMPR2Q13873 1038 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FAM53BQ14153 422 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 CSHL1Q14406 222 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 GLE1Q53GS7 698 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FBXO48Q5FWF7 155 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 KIRREL2Q6UWL6 708 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FRA10AC1Q70Z53 315 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FAM214BQ7L5A3 538 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 TMPRSS11BQ86T26 416 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ASPGQ86U10 573 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZC3H7AQ8IWR0 971 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ANKRD53Q8N9V6 530 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR11G2Q8NGC1 345 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR9A4Q8NGU2 314 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZCCHC10Q8TBK6 192 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC13A3Q8WWT9 602 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC5A11Q8WWX8 675 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 IFT81Q8WYA0 676 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 NACC2Q96BF6 587 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRIM44Q96DX7 344 aaPredicted RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 MOCOSQ96EN8 888 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 RCC1LQ96I51 464 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FMO2Q99518 471 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 CRB3Q9BUF7 120 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC25A23Q9BV35 468 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FUT8Q9BYC5 575 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 PELI2Q9HAT8 420 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 SEMA3GQ9NS98 782 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRPC4Q9UBN4 977 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 MTRF1LQ9UGC7 380 aaKnown RBP5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 C3orf18Q9UK00 162 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 FBXL4Q9UKA2 621 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 CDC14AQ9UNH5 594 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 COL12A1Q99715 3063 aa5.7□□□□□ -1.5
CTDSPL2-204ENST00000558966 SCN2AQ99250 2005 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 IDSB3KWA1 339 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 H0YIG0 161 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 PEX12O00623 359 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRPF4O43172 522 aaKnown RBP eCLIP5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 NDUFS4O43181 175 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR1F1O43749 312 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRAMEF4O60810 478 aa5.69□□□□□ -1.5
CTDSPL2-204ENST00000558966 JRKO75564 520 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms