RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NECTIN3Q9NQS3 549 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 STMN3Q9NZ72 180 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 NUDT4Q9NZJ9 180 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 ABI3Q9P2A4 366 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 MMACHCQ9Y4U1 282 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 CLDN16Q9Y5I7 305 aa15.96■□□□□ 0.15
LRRC28-210ENST00000558879 UNC79Q9P2D8 2635 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 CACNA1DQ01668 2161 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 LRIT2A6NDA9 550 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 CLGNO14967 610 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 MAN1A2O60476 641 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 PRMT3O60678 531 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 B4GALT2O60909 372 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 H2AFYO75367 372 aaKnown RBP15.95■□□□□ 0.14
LRRC28-210ENST00000558879 TFEBP19484 476 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 MAOAP21397 527 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 KCNC1P48547 511 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 SLC7A5Q01650 507 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 TUBA3CQ13748 450 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 C4orf17Q53FE4 359 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 TUBA3EQ6PEY2 450 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 ISCA2Q86U28 154 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 SCUBE1Q8IWY4 988 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 CENPLQ8N0S6 344 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-210ENST00000558879 OR2L5Q8NG80 312 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 MAGEB10Q96LZ2 347 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-210ENST00000558879 C16orf45Q96MC5 204 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-210ENST00000558879 PTCHD1Q96NR3 888 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 LRRC1Q9BTT6 524 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 EFCAB11Q9BUY7 163 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 RHBGQ9H310 441 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 ALG9Q9H6U8 611 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 PRDM9Q9NQV7 894 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 IGSF5Q9NSI5 407 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 CD274Q9NZQ7 290 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 ZNF490Q9ULM2 529 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-210ENST00000558879 RNF112Q9ULX5 631 aa15.95■□□□□ 0.14
LRRC28-210ENST00000558879 HMX2A2RU54 273 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 A8MUI8 341 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 FAM227AF5H4B4 570 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 ERI3O43414 337 aaKnown RBP15.94■□□□□ 0.14
LRRC28-210ENST00000558879 KERAO60938 352 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 RASAL1O95294 804 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 CLDN1O95832 211 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 STSP08842 583 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 LTA4HP09960 611 aaKnown RBP15.94■□□□□ 0.14
LRRC28-210ENST00000558879 CRABP2P29373 138 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 CASP2P42575 452 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 RAB38P57729 211 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 PCDH1Q08174 1060 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 RUNX2Q13950 521 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 DOC2AQ14183 400 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 TBCCQ15814 346 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 ARMC10Q8N2F6 343 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 KIF2BQ8N4N8 673 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 SLC5A8Q8N695 610 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 NFAM1Q8NET5 270 aaPredicted RBP15.94■□□□□ 0.14
LRRC28-210ENST00000558879 SUN3Q8TAQ9 357 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 STAG3L4Q8TBR4 150 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 ADAMTS18Q8TE60 1221 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 EXT2Q93063 718 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 SCMH1Q96GD3 660 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 SIGLEC12Q96PQ1 595 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 CD244Q9BZW8 370 aa15.94■□□□□ 0.14
LRRC28-210ENST00000558879 EXPH5Q8NEV8 1989 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 PCNX1Q96RV3 2341 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 CACNA1CQ13936 2221 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 A0A0G2JN53 185 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 ANKDD1BA6NHY2 528 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TGFBR3LH3BV60 316 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 PSMD12O00232 456 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 CDK2AP1O14519 115 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 CCNT2O60583 730 aaKnown RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 MTHFD2P13995 350 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 HPDP32754 393 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TAS2R50P59544 299 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 BTN3A2P78410 334 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 ACTN3Q08043 901 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TERF2Q15554 542 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 XKR6Q5GH73 641 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 ZNF766Q5HY98 468 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 UBAP2Q5T6F2 1119 aaKnown RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 HIST2H2BCQ6DN03 193 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TRIM40Q6P9F5 258 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 ABHD17CQ6PCB6 329 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 RAPH1Q70E73 1250 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 CCDC91Q7Z6B0 441 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TBC1D1Q86TI0 1168 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 RELL1Q8IUW5 271 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 SNX31Q8N9S9 440 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 APCDD1LQ8NCL9 501 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 TMEM52Q8NDY8 209 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 DNAJB8Q8NHS0 232 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 CCT6BQ92526 530 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 FAR2Q96K12 515 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 FUT8Q9BYC5 575 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 REXO4Q9GZR2 422 aaKnown RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 NMRAL1Q9HBL8 299 aa15.93■□□□□ 0.14
LRRC28-210ENST00000558879 PPIEQ9UNP9 301 aaKnown RBP15.93■□□□□ 0.14
LRRC28-210ENST00000558879 A0A088AWK7 358 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms