RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 BCAR3O75815 825 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 NDUFB8O95169 186 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ZCCHC18P0CG32 403 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CCDC130P13994 396 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 MYOD1P15172 320 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 GM2AP17900 193 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 NCF2P19878 526 aaPredicted RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 PAX7P23759 505 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 LMO1P25800 156 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CSTF2P33240 577 aaKnown RBP eCLIP3.49□□□□□ -1.85
TDP1-217ENST00000557782 OR1D2P34982 312 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 AHRP35869 848 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CEBPDP49716 269 aaPredicted RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 ACADVLP49748 655 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RGS4P49798 205 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ISL1P61371 349 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 EEF1A1P68104 462 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 TFF2Q03403 129 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 FUT7Q11130 342 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 KIR2DS5Q14953 304 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 HEPACAMQ14CZ8 416 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 TRIP10Q15642 601 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 MPPE1Q53F39 396 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RABGAP1LQ5R372 815 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 FNBP1LQ5T0N5 605 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 EEF1A1P5Q5VTE0 462 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 SNRNP48Q6IEG0 339 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 CBLN3Q6UW01 205 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CPEB2Q7Z5Q1 589 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 VPS36Q86VN1 386 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 C1QL4Q86Z23 238 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 DCP1BQ8IZD4 617 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 TTC5Q8N0Z6 440 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 FAM184AQ8NB25 1140 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CCDC148Q8NFR7 591 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 OR4C15Q8NGM1 316 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ZNF671Q8TAW3 534 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 TRMT10AQ8TBZ6 339 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 PNPT1Q8TCS8 783 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 MCHR2Q969V1 340 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 TMEM45BQ96B21 275 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 SLC41A3Q96GZ6 507 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RBM41Q96IZ5 413 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 CXorf58Q96LI9 332 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 C3orf30Q96M34 536 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 CSF3RQ99062 836 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 S1PR3Q99500 378 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 MTIF3Q9H2K0 278 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 RIOX1Q9H6W3 641 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 FN3KRPQ9HA64 309 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RAVER2Q9HCJ3 691 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 FAM114A2Q9NRY5 505 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 SEMA4GQ9NTN9 838 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 EXOC1Q9NV70 894 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ETNK2Q9NVF9 386 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 HYPKQ9NX55 129 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RNF186Q9NXI6 227 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 IL36AQ9UHA7 158 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 MRTO4Q9UKD2 239 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 AGO1Q9UL18 857 aaKnown RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 FZD10Q9ULW2 581 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 PLCL2Q9UPR0 1127 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 DLGAP4Q9Y2H0 992 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 OR10H1Q9Y4A9 318 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.49□□□□□ -1.85
TDP1-217ENST00000557782 ETV7Q9Y603 341 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 COLEC10Q9Y6Z7 277 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 KANK1Q14678 1352 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 NPC1L1Q9UHC9 1359 aa3.49□□□□□ -1.85
TDP1-217ENST00000557782 RAD54L2Q9Y4B4 1467 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 TTC41PQ6P2S7 1318 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 GSAPA4D1B5 854 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 MFSD2BA6NFX1 497 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF716A6NP11 495 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 C2CD4DB7Z1M9 353 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CTAGE5O15320 804 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF208O43345 1280 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 WDR1O75083 606 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 PROP1O75360 226 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ECI2O75521 394 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 WBP4O75554 376 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 SERPINA3P01011 423 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 MT-ND1P03886 318 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ZNF735P0CB33 412 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ODC1P11926 461 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CD59P13987 128 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 GJB2P29033 226 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 CCR1P32246 355 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 DUTP33316 252 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 CA8P35219 290 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 RFC4P35249 363 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 USP8P40818 1118 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 ACADSBP45954 432 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 SUCLG1P53597 346 aaKnown RBP3.48□□□□□ -1.85
TDP1-217ENST00000557782 SRSF1Q07955 248 aaKnown RBP eCLIP3.48□□□□□ -1.85
TDP1-217ENST00000557782 HSPA14Q0VDF9 509 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 TAF10Q12962 218 aa3.48□□□□□ -1.85
TDP1-217ENST00000557782 TRAF1Q13077 416 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms