RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 RPL9P32969 192 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 MDH2P40926 338 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 ZNF133P52736 654 aaPredicted RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 ADARP55265 1226 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 GEMIN4P57678 1058 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 EVCP57679 992 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 ACSM1Q08AH1 577 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 CUL4AQ13619 759 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 SNTB1Q13884 538 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 FASTKQ14296 549 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 GSG1Q2KHT4 349 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 LETM2Q2VYF4 491 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 RILPL1Q5EBL4 403 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 FUT10Q6P4F1 479 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 C4orf50Q6ZRC1 276 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 Q71RC1 249 aaPredicted RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 COX8CQ7Z4L0 72 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 PRUNE1Q86TP1 453 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 NME8Q8N427 588 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 P2RX5Q93086 422 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 GDAP1L1Q96MZ0 367 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 SPATA33Q96N06 139 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 HSD17B14Q9BPX1 270 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 EBF4Q9BQW3 602 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 KLHL4Q9C0H6 718 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 LIME1Q9H400 295 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 XAB2Q9HCS7 855 aaKnown RBP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 PLSCR3Q9NRY6 295 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 RPS6KB2Q9UBS0 482 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 AGTPBP1Q9UPW5 1226 aa1.61□□□□□ -2.15
FOXN3-216ENST00000557496 NIP7Q9Y221 180 aaKnown RBP eCLIP1.61□□□□□ -2.15
FOXN3-216ENST00000557496 ZNF487B1APH4 448 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 TCP11X1B4DZS4 312 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ADAM20O43506 726 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 SCO2O43819 266 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 CELF2O95319 508 aaKnown RBP1.6□□□□□ -2.15
FOXN3-216ENST00000557496 IGHG3P01860 377 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 DNTTP04053 509 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 P0C879 139 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 CTNNA2P26232 953 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 HMGCS2P54868 508 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 MTCP1P56278 107 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ISXQ2M1V0 245 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 REP15Q6BDI9 236 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ZNF544Q6NX49 715 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 C15orf52Q6ZUT6 534 aaKnown RBP1.6□□□□□ -2.15
FOXN3-216ENST00000557496 AMIGO1Q86WK6 493 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ZNRF1Q8ND25 227 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ZNF564Q8TBZ8 553 aaPredicted RBP1.6□□□□□ -2.15
FOXN3-216ENST00000557496 SPSB1Q96BD6 273 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 ANKRD27Q96NW4 1050 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 BARD1Q99728 777 aaKnown RBP1.6□□□□□ -2.15
FOXN3-216ENST00000557496 PLEKHA3Q9HB20 300 aa1.6□□□□□ -2.15
FOXN3-216ENST00000557496 DBF4Q9UBU7 674 aaPredicted RBP1.6□□□□□ -2.15
FOXN3-216ENST00000557496 HEG1Q9ULI3 1381 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 ANHXE9PGG2 379 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 PANO1I0J062 215 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 MLNRO43193 412 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CREB3O43889 395 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 BEST1O76090 585 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 OR52Z1P0C646 297 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 GDF1P27539 372 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 MC5RP33032 325 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 BRCC3P46736 316 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 SLC1A6P48664 564 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CSE1LP55060 971 aaKnown RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 PEX3P56589 373 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 RPS27AP62979 156 aaKnown RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 RBPJQ06330 500 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 SULT2A1Q06520 285 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 ALCAMQ13740 583 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 C17orf58Q2M2W7 97 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 LRRC37A5PQ49AS3 106 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CELF3Q5SZQ8 465 aaKnown RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 GORABQ5T7V8 394 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 KRT39Q6A163 491 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 TCEAL6Q6IPX3 200 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 ZCCHC12Q6PEW1 402 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 GPR141Q7Z602 305 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 OR6F1Q8NGZ6 308 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CD99L2Q8TCZ2 262 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 PCNPQ8WW12 178 aaKnown RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 FRAT1Q92837 279 aaPredicted RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 FAM104AQ969W3 186 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 ZBED6CLQ96FA7 236 aaPredicted RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CFAP57Q96MR6 1250 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 SDF4Q9BRK5 362 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 HES7Q9BYE0 225 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 BLOC1S4Q9NUP1 217 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 CHORDC1Q9UHD1 332 aaPredicted RBP1.59□□□□□ -2.15
FOXN3-216ENST00000557496 MOKQ9UQ07 419 aa1.59□□□□□ -2.15
FOXN3-216ENST00000557496 EPOPA6NHQ4 379 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 E5RGE8 158 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 LRRTM2O43300 516 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 ZNF853P0CG23 659 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 MDKP21741 143 aaPredicted RBP1.58□□□□□ -2.16
FOXN3-216ENST00000557496 WNT4P56705 351 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 CRMP1Q14194 572 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 KIAA0040Q15053 153 aa1.58□□□□□ -2.16
FOXN3-216ENST00000557496 ARMC4Q5T2S8 1044 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms