RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 C21orf58P58505 322 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 TP53BP2Q13625 1128 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 TIGD6Q17RP2 521 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 GCNT6Q5T4J0 391 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 C12orf40Q86WS4 652 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 LSRQ86X29 649 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 DNAJC22Q8N4W6 341 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 C16orf78Q8WTQ4 265 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 FOPNLQ96NB1 174 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 DSN1Q9H410 356 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 DMRT3Q9NQL9 472 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ABCB10Q9NRK6 738 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 PCDHGA2Q9Y5H1 932 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 SNX8Q9Y5X2 465 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 E9PQ18 207 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SOD1P00441 154 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 HTRA3P83110 453 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 NFE2L1Q14494 772 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 IFI44LQ53G44 452 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SLC22A16Q86VW1 577 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 RBM12BQ8IXT5 1001 aaKnown RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 OR4C15Q8NGM1 316 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 PPCDCQ96CD2 204 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 C6orf62Q9GZU0 229 aaPredicted RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 CCNB1IP1Q9NPC3 277 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 OSGIN1Q9UJX0 560 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 ALPK3Q96L96 1907 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 IL3P08700 152 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 HSD3B1P14060 373 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 HSD3B2P26439 372 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SEPHS1P49903 392 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 UBE2UQ5VVX9 321 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 DPPA4Q7L190 304 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 POP5Q969H6 163 aaKnown RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SLC38A4Q969I6 547 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 ITFG2Q969R8 447 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 MAGEB10Q96LZ2 347 aaPredicted RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 LRRC3BQ96PB8 259 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 RSPO3Q9BXY4 272 aaPredicted RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 FBXO8Q9NRD0 319 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 C1GALT1Q9NS00 363 aa16.96■□□□□ 0.31
XRCC3-218ENST00000557439 CFAP20Q9Y6A4 193 aaKnown RBP16.96■□□□□ 0.31
XRCC3-218ENST00000557439 SPINT1O43278 529 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 TLL1O43897 1013 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 DNTTP04053 509 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 TGM1P22735 817 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 POU1F1P28069 291 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 CDK6Q00534 326 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 TAP2Q03519 686 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 DUSP7Q16829 419 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 LEXMQ3ZCV2 418 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 CCDC149Q6ZUS6 474 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 CAMKMTQ7Z624 323 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 SPRED2Q7Z698 418 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 CLIP4Q8N3C7 705 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 PSD4Q8NDX1 1056 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 RHOXF1Q8NHV9 184 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 PHF10Q8WUB8 498 aaKnown RBP16.95■□□□□ 0.3
XRCC3-218ENST00000557439 TCF20Q9UGU0 1960 aaKnown RBP16.95■□□□□ 0.3
XRCC3-218ENST00000557439 XIRP2A4UGR9 3374 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 FKTNO75072 461 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 RHOP08100 348 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 IGFBP1P08833 259 aaPredicted RBP16.95■□□□□ 0.3
XRCC3-218ENST00000557439 SERPINB10P48595 397 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 IPCEF1Q8WWN9 437 aaPredicted RBP16.95■□□□□ 0.3
XRCC3-218ENST00000557439 TIFAQ96CG3 184 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 FAM129BQ96TA1 746 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 SLC6A16Q9GZN6 736 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 ATP6V1HQ9UI12 483 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 CKAP5Q14008 2032 aa16.95■□□□□ 0.3
XRCC3-218ENST00000557439 ADAMDEC1O15204 470 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 RECKO95980 971 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ADH1AP07327 375 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 C1GALT1C1LP0DN25 315 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 NNMTP40261 264 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ST3GAL4Q11206 333 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 TEAD4Q15561 434 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 MICAQ29983 383 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 RAET1GQ6H3X3 334 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 TNFAIP8L2Q6P589 184 aaPredicted RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 FAM83HQ6ZRV2 1179 aaPredicted RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF547Q8IVP9 402 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 OR52N2Q8NGI0 321 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 ZNF675Q8TD23 568 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 S100ZQ8WXG8 99 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 STARD8Q92502 1023 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 HTRA1Q92743 480 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 DACH2Q96NX9 599 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CENPOQ9BU64 300 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 BHLHE41Q9C0J9 482 aaPredicted RBP16.94■□□□□ 0.3
XRCC3-218ENST00000557439 MS4A12Q9NXJ0 267 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 OGDHLQ9ULD0 1010 aa16.94■□□□□ 0.3
XRCC3-218ENST00000557439 CAB39Q9Y376 341 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms