RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ZNF227Q86WZ6 799 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 CEP97Q8IW35 865 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 KLHDC8AQ8IYD2 350 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 ARMC10Q8N2F6 343 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 GHDCQ8N2G8 530 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 TTLQ8NG68 377 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 TMEM125Q96AQ2 219 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 RHBDF1Q96CC6 855 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 NPLQ9BXD5 320 aaPredicted RBP14.86□□□□□ -0.03
TUBB3-213ENST00000557262 TRIM31Q9BZY9 425 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 AICDAQ9GZX7 198 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 KCNF1Q9H3M0 494 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 RHOJQ9H4E5 214 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 NT5DC2Q9H857 520 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 POPDC3Q9HBV1 291 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 GPAMQ9HCL2 828 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 MEMO1Q9Y316 297 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 MMACHCQ9Y4U1 282 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
TUBB3-213ENST00000557262 EFCAB8A8MWE9 144 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 C4orf51C9J302 202 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 CLDN4O14493 209 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 GSTM2P28161 218 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 PAFAH1B1P43034 410 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 SLC6A12P48065 614 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 CLCN2P51788 898 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 SLC12A2P55011 1212 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 GNG11P61952 73 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 RUNX2Q13950 521 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 FASTKD3Q14CZ7 662 aaKnown RBP14.85□□□□□ -0.03
TUBB3-213ENST00000557262 C18orf21Q32NC0 220 aaPredicted RBP14.85□□□□□ -0.03
TUBB3-213ENST00000557262 KRT78Q8N1N4 520 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 APCDD1LQ8NCL9 501 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 B3GNT7Q8NFL0 401 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 GAL3ST3Q96A11 431 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 MS4A6EQ96DS6 147 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 SEC16BQ96JE7 1060 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 MCMBPQ9BTE3 642 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 PITHD1Q9GZP4 211 aaPredicted RBP14.85□□□□□ -0.03
TUBB3-213ENST00000557262 DERL2Q9GZP9 239 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 APCP25054 2843 aa14.85□□□□□ -0.03
TUBB3-213ENST00000557262 CSMD1Q96PZ7 3565 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 LRIT2A6NDA9 550 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 ANKDD1BA6NHY2 528 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 KLRC4-KLRK1H3BQV0 150 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 COX6B1P14854 86 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 ABOP16442 354 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 ZNF24P17028 368 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 PTGER4P35408 488 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 HSD17B7P56937 341 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 POU4F1Q01851 419 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 SLBPQ14493 270 aaKnown RBP eCLIP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 TERF2Q15554 542 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 TGFBIQ15582 683 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 RNFT1Q5M7Z0 435 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 ZBED8Q8IZ13 594 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 CPSF7Q8N684 471 aaKnown RBP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 POGLUT1Q8NBL1 392 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 CCT6BQ92526 530 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 PDLIM2Q96JY6 352 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 GRPEL1Q9HAV7 217 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 PRTFDC1Q9NRG1 225 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 PNO1Q9NRX1 252 aaKnown RBP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 GPRC5BQ9NZH0 403 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 KLF13Q9Y2Y9 288 aaPredicted RBP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 MTO1Q9Y2Z2 717 aaKnown RBP14.84□□□□□ -0.03
TUBB3-213ENST00000557262 SNX24Q9Y343 169 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 PCNX1Q96RV3 2341 aa14.84□□□□□ -0.03
TUBB3-213ENST00000557262 A0A088AWK7 358 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 A0A0G2JN53 185 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 TRBV11-1A0A0K0K1C0 115 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 NCF1BA6NI72 391 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 USP27XA6NNY8 438 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 NCF1CA8MVU1 366 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 TAPBPO15533 448 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 ERI3O43414 337 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 B3GALT2O43825 422 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 CLEC3AO75596 197 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 MYO1DO94832 1006 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 CLDN14O95500 239 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 SNRPB2P08579 225 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 NCF1P14598 390 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 ZNF10P21506 573 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 ELAVL4P26378 380 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 HNRNPH1P31943 449 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 HPDP32754 393 aaPredicted RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 GGT5P36269 586 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 RPL21P46778 160 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 RAB38P57729 211 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 CDKL4Q5MAI5 379 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 DOLPP1Q86YN1 238 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 SULF2Q8IWU5 870 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 SCUBE1Q8IWY4 988 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 TCAIMQ8N3R3 496 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 TMEM156Q8N614 296 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 BBOF1Q8ND07 529 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 PYROXD1Q8WU10 500 aa14.83□□□□□ -0.04
TUBB3-213ENST00000557262 MTFMTQ96DP5 389 aaKnown RBP14.83□□□□□ -0.04
TUBB3-213ENST00000557262 TSPAN17Q96FV3 270 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms