RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KCNK10P57789 538 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ERVK-8P63133 956 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 FOXM1Q08050 763 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CNTN1Q12860 1018 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TRAP1Q12931 704 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 RPA4Q13156 261 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 PRKG2Q13237 762 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SGCGQ13326 291 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ENPP2Q13822 863 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 BOP1Q14137 746 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 GRB7Q14451 532 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 STARD3Q14849 445 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 AP5B1Q2VPB7 878 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 POM121L1PQ3SYA9 428 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 VPS26BQ4G0F5 336 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 XKR7Q5GH72 579 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 LRRC73Q5JTD7 316 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SAMD4BQ5PRF9 694 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 C10orf62Q5T681 223 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 WLSQ5T9L3 541 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ABHD17BQ5VST6 288 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CACHD1Q5VU97 1274 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 LIPJQ5W064 366 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 PNCKQ6P2M8 343 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TMEM220Q6QAJ8 160 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 PARM1Q6UWI2 310 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 Q6ZSR9 355 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TRMT11Q7Z4G4 463 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 ADGRG6Q86SQ4 1221 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 MYLK4Q86YV6 388 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 GALNT13Q8IUC8 556 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 RASGRP3Q8IV61 690 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.3□□□□□ -1.72
SRP54-212ENST00000556992 CFAP206Q8IYR0 622 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CHPFQ8IZ52 775 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SLC22A15Q8IZD6 547 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 MINDY1Q8N5J2 469 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ZNF366Q8N895 744 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SNX31Q8N9S9 440 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 OR4F6Q8NGB9 312 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 OR52B6Q8NGF0 335 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 LKAAEAR1Q8TD35 194 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SETD7Q8WTS6 366 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 WDR60Q8WVS4 1066 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ESAMQ96AP7 390 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 FBXL8Q96CD0 374 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 NUS1Q96E22 293 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 HIC2Q96JB3 615 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 LINC00615Q96LM1 132 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 Q96MF0 132 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 KCNA7Q96RP8 456 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 MYADMQ96S97 322 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ZBTB18Q99592 522 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 KXD1Q9BQD3 176 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 PLA2G2FQ9BZM2 168 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 RSPH9Q9H1X1 276 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 VCX3BQ9H321 246 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TUBB1Q9H4B7 451 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ELOVL6Q9H5J4 265 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 EBF2Q9HAK2 575 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 FBRSL1Q9HCM7 1045 aaKnown RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 S100A14Q9HCY8 104 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SPAG4Q9NPE6 437 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TRPV5Q9NQA5 729 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 HEBP1Q9NRV9 189 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 DNAJC11Q9NVH1 559 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 AIG1Q9NVV5 245 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 NMRK1Q9NWW6 199 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ADA2Q9NZK5 511 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 ZIM2Q9NZV7 527 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CCDC167Q9P0B6 97 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 NKX1-2Q9UD57 310 aaPredicted RBP4.3□□□□□ -1.72
SRP54-212ENST00000556992 ZNF225Q9UK10 706 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 SCML1Q9UN30 329 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 POMPQ9Y244 141 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 BTRCQ9Y297 605 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 FADS3Q9Y5Q0 445 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 CHD7Q9P2D1 2997 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 REV3LO60673 3130 aa4.3□□□□□ -1.72
SRP54-212ENST00000556992 TRIP11Q15643 1979 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 PLXNA3P51805 1871 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 NLRC5Q86WI3 1866 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 MGAT4DA6NG13 374 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 IGLON5A6NGN9 336 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 DNAJC9-AS1A6NH13 148 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 CCDC154A6NI56 674 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 OR2AG2A6NM03 316 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 MEI4A8MW99 385 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 K7EQS6 105 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 TRIM38O00635 465 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 FBP2O00757 339 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 CLGNO14967 610 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 INPP4BO15327 924 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 SGTAO43765 313 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 PEX1O43933 1283 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 SEC22BO75396 215 aa4.29□□□□□ -1.72
SRP54-212ENST00000556992 MTX2O75431 263 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms