RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PAX9P55771 341 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ST8SIA6P61647 398 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ARHGAP1Q07960 439 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 PTPN14Q15678 1187 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ZNF674Q2M3X9 581 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 KBTBD12Q3ZCT8 623 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GLRA4Q5JXX5 417 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 SLC24A5Q71RS6 500 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 FCRLAQ7L513 359 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 COX8CQ7Z4L0 72 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 PIGWQ7Z7B1 504 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ANKRD46Q86W74 232 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 TUSC5Q8IXB3 177 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 CCDC170Q8IYT3 715 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 TDHQ8IZJ6 230 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GBP7Q8N8V2 638 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GPRC5AQ8NFJ5 357 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 SMAP2Q8WU79 429 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 CKAP2Q8WWK9 683 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 METTL21AQ8WXB1 218 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 RASL10BQ96S79 203 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 NKX3-1Q99801 234 aaPredicted RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 PRMT1Q99873 361 aaKnown RBP2.47□□□□□ -2.01
SCFD1-218ENST00000556256 CACNG6Q9BXT2 260 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 RAB9BQ9NP90 201 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 GPR173Q9NS66 373 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 ABCB8Q9NUT2 735 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 TBC1D13Q9NVG8 400 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 KIF25-AS1Q9Y6Z4 181 aa2.47□□□□□ -2.01
SCFD1-218ENST00000556256 PFASO15067 1338 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TRBV4-1A0A0J9YWV2 114 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 ANKDD1BA6NHY2 528 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 ASB14A6NK59 587 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 GPRIN2O60269 458 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 ACSL4O60488 711 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SAP30O75446 220 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SP9P0CG40 484 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 MYOGP15173 224 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 RPL35AP18077 110 aaKnown RBP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 EDNRAP25101 427 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SSTR1P30872 391 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SOX3P41225 446 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 OR3A3P47888 321 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 ZFP36L2P47974 494 aaKnown RBP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 KHKP50053 298 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SNU13P55769 128 aaKnown RBP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM50BP56557 158 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 DCDC1P59894 354 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 C17orf67Q0P5P2 114 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 SGCGQ13326 291 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM132DQ14C87 1099 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TAB1Q15750 504 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 CCDC158Q5M9N0 1113 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 FHL5Q5TD97 284 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 IYDQ6PHW0 289 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 DHRS11Q6UWP2 260 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 VITQ6UXI7 678 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TMEM64Q6YI46 380 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 C5orf24Q7Z6I8 188 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 IQCA1Q86XH1 822 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 CATSPERDQ86XM0 798 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 AQP12AQ8IXF9 295 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 KLHDC8AQ8IYD2 350 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 NUP93Q8N1F7 819 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 GPD1LQ8N335 351 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 KLHL30-AS1Q8NEE0 82 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 OR4C15Q8NGM1 316 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TYMSOSQ8TAI1 123 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 TOMM40LQ969M1 308 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 LURAP1Q96LR2 239 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 C2orf48Q96LS8 159 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 C1orf147Q96MC9 270 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 NECTIN4Q96NY8 510 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 HNRNPABQ99729 332 aaKnown RBP2.46□□□□□ -2.02
SCFD1-218ENST00000556256 RNF121Q9H920 327 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 IL1RAPL2Q9NP60 686 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 MIS18AQ9NYP9 233 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 FBXL5Q9UKA1 691 aa2.46□□□□□ -2.02
SCFD1-218ENST00000556256 E5RGE8 158 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF263O14978 683 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 SCO2O43819 266 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CYTIPO60759 359 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CEACAM4O75871 244 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 GLCEO94923 617 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 GOSR1O95249 250 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 C8orf89P0DMQ9 161 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 PRKACGP22612 351 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 COPB2P35606 906 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 LBX1P52954 281 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 XGP55808 180 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 STX1BP61266 288 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 RPP38P78345 283 aaKnown RBP2.45□□□□□ -2.02
SCFD1-218ENST00000556256 IRX4P78413 519 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 NDPQ00604 133 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 CDH18Q13634 790 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 MORF4L2Q15014 288 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 AGAP6Q5VW22 663 aa2.45□□□□□ -2.02
SCFD1-218ENST00000556256 PM20D1Q6GTS8 502 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms