RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ATP13A2Q9NQ11 1180 aa10.28□□□□□ -0.76
MTHFD1-210ENST00000555252 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.28□□□□□ -0.76
MTHFD1-210ENST00000555252 ZNF226Q9NYT6 803 aa10.28□□□□□ -0.76
MTHFD1-210ENST00000555252 CMAHPQ9Y471 501 aa10.28□□□□□ -0.76
MTHFD1-210ENST00000555252 SUV39H1O43463 412 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 PROM1O43490 865 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 VIPP01282 170 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 C1QBP02746 253 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 C8GP07360 202 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 OR56A5P0C7T3 313 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 CHMP24386 653 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 MYL9P24844 172 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 ITGB7P26010 798 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 CDKN2CP42773 168 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 GZMKP49863 264 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 RAB25P57735 213 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 CDC42P60953 191 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 KCNJ10P78508 379 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 LMAN2Q12907 356 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 SLAMF1Q13291 335 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 PPIGQ13427 754 aaKnown RBP eCLIP10.27□□□□□ -0.762e-7■■■□□ 16.8
MTHFD1-210ENST00000555252 ZNF79Q15937 498 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 SLC35F1Q5T1Q4 408 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 MEDAGQ5VYS4 303 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 CNKSR3Q6P9H4 555 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.27□□□□□ -0.769e-10■■■■■ 31.3
MTHFD1-210ENST00000555252 VTCN1Q7Z7D3 282 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 DDX53Q86TM3 631 aaKnown RBP10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 FAM124AQ86V42 546 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 CLDN19Q8N6F1 224 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 SCRN2Q96FV2 425 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 EGLN2Q96KS0 407 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 DMRTB1Q96MA1 342 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 KCNC2Q96PR1 638 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 SLC22A12Q96S37 553 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 COPS8Q99627 209 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 DOHHQ9BU89 302 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 GTPBP2Q9BX10 602 aaKnown RBP10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 ASPNQ9BXN1 380 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 ZNF334Q9HCZ1 680 aaPredicted RBP10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 PLSCR3Q9NRY6 295 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 IMPAD1Q9NX62 359 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 GPR83Q9NYM4 423 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 SPG21Q9NZD8 308 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 KCNN3Q9UGI6 736 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 KLHL20Q9Y2M5 609 aa10.27□□□□□ -0.76
MTHFD1-210ENST00000555252 PCM1Q15154 2024 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ARRDC5A6NEK1 342 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 MAGEB17A8MXT2 336 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 LOC730098B7Z3J9 87 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF670-ZNF695F2Z2N8 137 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 TNFRSF11BO00300 401 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 AP3D1O14617 1153 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 FFAR3O14843 346 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 SLC16A5O15375 505 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 GPR42O15529 346 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 PQBP1O60828 265 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 DIRAS1O95057 198 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 MPC1LP0DKB6 136 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ENGP17813 658 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 LAG3P18627 525 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 HTR2BP41595 481 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 VEGFBP49765 207 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 HNMTP50135 292 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 CCL23P55773 120 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 LRRC74AQ0VAA2 488 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 TSTQ16762 297 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 GLYR1Q49A26 553 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 TXNDC8Q6A555 127 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 PLAG1Q6DJT9 500 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 NLRP8Q86W28 1048 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 CLDN22Q8N7P3 220 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 OR10G2Q8NGC3 310 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 OR8J2Q8NGG1 315 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 OR4C15Q8NGM1 316 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 OR10Q1Q8NGQ4 319 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 OR6K2Q8NGY2 324 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ECHDC3Q96DC8 303 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ASIC4Q96FT7 647 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 MYOCQ99972 504 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 KCNS3Q9BQ31 491 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 CPEB1Q9BZB8 566 aaKnown RBP10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ACPTQ9BZG2 426 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 ZNF556Q9HAH1 456 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 C12orf10Q9HB07 376 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 RANGRFQ9HD47 186 aaPredicted RBP10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 RAD18Q9NS91 495 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 DUSP12Q9UNI6 340 aa10.27□□□□□ -0.77
MTHFD1-210ENST00000555252 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 COL4A6Q14031 1691 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 IGLV3-16A0A075B6K0 115 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 A0A1W2PQ09 198 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 B4DXG7 233 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 FPGTO14772 594 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 KPNA5O15131 536 aa10.26□□□□□ -0.77
MTHFD1-210ENST00000555252 HIST1H2AGP0C0S8 130 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms