RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 XPO1O14980 1071 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 ERLIN1O75477 346 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 GMNNO75496 209 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 SP9P0CG40 484 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 PTPN6P29350 595 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 NSFP46459 744 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 HNRNPH2P55795 449 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 CLDN15P56746 228 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 TNFRSF17Q02223 184 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 ILF2Q12905 390 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 CARTPTQ16568 116 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 ACKR1Q16570 336 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 SLC36A3Q495N2 470 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 ZDHHC21Q8IVQ6 265 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 THEM5Q8N1Q8 247 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 OR2AK2Q8NG84 335 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 OR6C4Q8NGE1 309 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 DQX1Q8TE96 717 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 GANCQ8TET4 914 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 SLC44A1Q8WWI5 657 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 GIMAP1Q8WWP7 306 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 GGHQ92820 318 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 CASP10Q92851 521 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 AZIN2Q96A70 460 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 CNOT6LQ96LI5 555 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 ZNF583Q96ND8 569 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 PSKH2Q96QS6 385 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 SECISBP2Q96T21 854 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 PCYT2Q99447 389 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 CCT7Q99832 543 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 BTBD10Q9BSF8 475 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 LRRC1Q9BTT6 524 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 CDK19Q9BWU1 502 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 BARHL1Q9BZE3 327 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 VCX2Q9H322 139 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 ACTR8Q9H981 624 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 VAT1LQ9HCJ6 419 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 TRPV5Q9NQA5 729 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 PHPT1Q9NRX4 125 aaPredicted RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 AIPL1Q9NZN9 384 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 B3GAT1Q9P2W7 334 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 ATXN10Q9UBB4 475 aa4.8□□□□□ -1.64
VRK1-203ENST00000555067 NOCTQ9UK39 431 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 RALYQ9UKM9 306 aaKnown RBP4.8□□□□□ -1.64
VRK1-203ENST00000555067 TTC21BQ7Z4L5 1316 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 WDR19Q8NEZ3 1342 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 TP53BP1Q12888 1972 aaPredicted RBP4.79□□□□□ -1.64
VRK1-203ENST00000555067 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 TRAV24A0A0B4J272 114 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 HYKKA2RU49 373 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CASTOR2A6NHX0 329 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 SLC15A5A6NIM6 579 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 SLC22A2O15244 555 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 ADAM12O43184 909 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 VPS26AO75436 327 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 OR6A2O95222 327 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GAS8O95995 478 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 NUDT17P0C025 328 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 S1PR1P21453 382 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 OTX2P32243 289 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GNL1P36915 607 aaPredicted RBP4.79□□□□□ -1.64
VRK1-203ENST00000555067 CTSCP53634 463 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 PDIA5Q14554 519 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 RFTN1Q14699 578 aaPredicted RBP4.79□□□□□ -1.64
VRK1-203ENST00000555067 FILIP1LQ4L180 1135 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CAVIN4Q5BKX8 364 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GRTP1Q5TC63 336 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 LYSMD4Q5XG99 296 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 ZNF770Q6IQ21 691 aaPredicted RBP4.79□□□□□ -1.64
VRK1-203ENST00000555067 RGMBQ6NW40 437 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 TAS2R42Q7RTR8 314 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 ANKRD33Q7Z3H0 272 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 COMMD2Q86X83 199 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CROCCP3Q8IVE0 287 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 RNF113BQ8IZP6 322 aaKnown RBP4.79□□□□□ -1.64
VRK1-203ENST00000555067 FADS6Q8N9I5 356 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CCDC63Q8NA47 563 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CNBD1Q8NA66 436 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 FAM76AQ8TAV0 307 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 ZNF671Q8TAW3 534 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 AGR3Q8TD06 166 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 HAS2Q92819 552 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 PYCR2Q96C36 320 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 MTERF3Q96E29 417 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GIMAP5Q96F15 307 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 COG3Q96JB2 828 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 ZBTB18Q99592 522 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 NTMT1Q9BV86 223 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GFRA4Q9GZZ7 299 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 DPEP3Q9H4B8 488 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 CRLF2Q9HC73 371 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 YAE1D1Q9NRH1 226 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GSN-AS1Q9NRJ2 163 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GLRX2Q9NS18 164 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 GTSE1Q9NYZ3 720 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 LRWD1Q9UFC0 647 aa4.79□□□□□ -1.64
VRK1-203ENST00000555067 WDR83OSQ9Y284 106 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms