RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GSTM1P09488 218 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FAM58BPP0C7Q3 252 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RD3LP0DJH9 198 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CALCBP10092 127 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LCP1P13796 627 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DRD2P14416 443 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GNSP15586 552 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PTPN1P18031 435 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DDCP20711 480 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 YWHAQP27348 245 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 POU1F1P28069 291 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MSX2P35548 267 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DLSTP36957 453 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLC6A11P48066 632 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 IDH3AP50213 366 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CLCN7P51798 805 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HNRNPFP52597 415 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CDH6P55285 790 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PCDH1Q08174 1060 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 POU4F2Q12837 409 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CA9Q16790 459 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DUOXA2Q1HG44 320 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RGS21Q2M5E4 152 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MPPE1Q53F39 396 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GCNT6Q5T4J0 391 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 BTBD8Q5XKL5 378 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RAP1GAP2Q684P5 730 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 KIAA0930Q6ICG6 404 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CLEC9AQ6UXN8 241 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 WASH2PQ6VEQ5 465 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PAQR9Q6ZVX9 377 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZDHHC21Q8IVQ6 265 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MISPQ8IVT2 679 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LINC00518Q8N0U6 118 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM130Q8N3G9 435 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF557Q8N988 423 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TXNDC5Q8NBS9 432 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CAMKVQ8NCB2 501 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CPEB3Q8NE35 698 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 STEAP2Q8NFT2 490 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 OR52J3Q8NH60 311 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 WFIKKN2Q8TEU8 576 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CA5BP1Q8WTZ4 195 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NRG4Q8WWG1 115 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CPA5Q8WXQ8 436 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HSD17B8Q92506 261 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LPGAT1Q92604 370 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 IGSF8Q969P0 613 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CIDECQ96AQ7 238 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PCED1BQ96HM7 432 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HPDLQ96IR7 371 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LMLNQ96KR4 655 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SNX22Q96L94 193 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 OLFM3Q96PB7 478 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLITRK1Q96PX8 696 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 XPO6Q96QU8 1125 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF607Q96SK3 696 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RTN4RQ9BZR6 473 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TRIM15Q9C019 465 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SLC6A17Q9H1V8 727 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SAV1Q9H4B6 383 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 POLR1BQ9H9Y6 1135 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SMURF2Q9HAU4 748 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MLXIPLQ9NP71 852 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CHRAC1Q9NRG0 131 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZCCHC3Q9NUD5 404 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 DMAC2Q9NW81 257 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PTTG3PQ9NZH4 202 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LIMA1Q9UHB6 759 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 MKLN1Q9UL63 735 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PADI2Q9Y2J8 665 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 AAR2Q9Y312 384 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 RBMX2Q9Y388 322 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PCDHB1Q9Y5F3 818 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PUS1Q9Y606 427 aaKnown RBP eCLIP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CPQQ9Y646 472 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 COPG1Q9Y678 874 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ABCA7Q8IZY2 2146 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CXorf51AA0A1B0GTR3 108 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TEX51A0A1B0GUA7 166 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 ZNF233A6NK53 670 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 LIPT2A6NK58 231 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PATE3B3GLJ2 98 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TMEM233B4DJY2 109 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 H7C0C1 242 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 FOXE1O00358 373 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NR5A2O00482 541 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 PEX12O00623 359 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GSC2O15499 205 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NUPL2O15504 423 aaKnown RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 CLOCKO15516 846 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 NDUFA2O43678 99 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TLX2O43763 284 aaPredicted RBP2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SCN2BO60939 215 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TULP3O75386 442 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 C1QL1O75973 258 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 TNNC2P02585 160 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 GFAPP14136 432 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 HK1P19367 917 aa2.6□□□□□ -1.99
PRPF39-206ENST00000554429 SRMP19623 302 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms