RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CDH16O75309 829 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 KLHL18O94889 574 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ALPPP05187 535 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 CAPN1P07384 714 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SERPINA6P08185 405 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ZGLP1P0C6A0 271 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 FAM87AP0C7U9 286 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 PCNAP12004 261 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 IL1RNP18510 177 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 JAK1P23458 1154 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 MMP11P24347 488 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 HNF4AP41235 474 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 CCT5P48643 541 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 AP2B1P63010 937 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 NFKB2Q00653 900 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 IL10RAQ13651 578 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ATP1A4Q13733 1029 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SETDB1Q15047 1291 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 C18orf21Q32NC0 220 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 LINC00303Q3SY05 128 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TUBB8Q3ZCM7 444 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 MINDY4Q4G0A6 757 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 FBXO48Q5FWF7 155 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TECRLQ5HYJ1 363 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TOR1AIP1Q5JTV8 583 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 RNFT1Q5M7Z0 435 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 WDR93Q6P2C0 686 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 MED27Q6P2C8 311 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TRIM40Q6P9F5 258 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 EMBQ6PCB8 327 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TIFABQ6ZNK6 161 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SLCO4C1Q6ZQN7 724 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SHISA6Q6ZSJ9 500 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 VN1R4Q7Z5H5 301 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 MRGPREQ86SM8 312 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 APLFQ8IW19 511 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 PTGR2Q8N8N7 351 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 CCDC63Q8NA47 563 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 OR9A4Q8NGU2 314 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 NT5CQ8TCD5 201 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 UBTD2Q8WUN7 234 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ISL2Q96A47 359 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 TM4SF19Q96DZ7 209 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 MAGEB10Q96LZ2 347 aaPredicted RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 C10orf90Q96M02 699 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SLC25A23Q9BV35 468 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 IQCGQ9H095 443 aaKnown RBP7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SLC25A18Q9H1K4 315 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ANKZF1Q9H8Y5 726 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 ACTR8Q9H981 624 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 XPR1Q9UBH6 696 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 CTSFQ9UBX1 484 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 DCDC2Q9UHG0 476 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 C3orf18Q9UK00 162 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SH2B3Q9UQQ2 575 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 NAALAD2Q9Y3Q0 740 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 SPACA6W5XKT8 324 aa7.9□□□□□ -1.14
PSEN1-209ENST00000553855 HMX2A2RU54 273 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 STX16-NPEPL1H3BU86 382 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 SGK494L7N484 410 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 AGPSO00116 658 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 STX16O14662 325 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 GLRA3O75311 464 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 RDH16O75452 317 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 CLEC3AO75596 197 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 KLF7O75840 302 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 GSTA1P08263 222 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 CYC1P08574 325 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 FURINP09958 794 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 ITGA3P26006 1051 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 EEF1DP29692 281 aaKnown RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 MAGEA12P43365 314 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 XCR1P46094 333 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 SLCO1A2P46721 670 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 AGTR2P50052 363 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 CCNG1P51959 295 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 PGDP52209 483 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 RAP1GDS1P52306 607 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 RAB8AP61006 207 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 VSNL1P62760 191 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 KLC1Q07866 573 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 NFATC3Q12968 1075 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 AIMP2Q13155 320 aaKnown RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 GTF2H2Q13888 395 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 DOC2AQ14183 400 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 PCBP2Q15366 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 TBCCQ15814 346 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 ZXDCQ2QGD7 858 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 DEFB134Q4QY38 66 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 LACTB2Q53H82 288 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 SOWAHCQ53LP3 525 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 VWA2Q5GFL6 755 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 UBAP2Q5T6F2 1119 aaKnown RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 LIPJQ5W064 366 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 TTC19Q6DKK2 380 aaPredicted RBP7.89□□□□□ -1.15
PSEN1-209ENST00000553855 GTF2H2CQ6P1K8 395 aa7.89□□□□□ -1.15
PSEN1-209ENST00000553855 CHSY3Q70JA7 882 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms