RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 CMTM7Q96FZ5 175 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 FAR2Q96K12 515 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 QRFPRQ96P65 431 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 KCNC2Q96PR1 638 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 CDK15Q96Q40 435 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 SMC6Q96SB8 1091 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 CENPKQ9BS16 269 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 NPLQ9BXD5 320 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 COPS7BQ9H9Q2 264 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 RRAGDQ9NQL2 400 aaPredicted RBP11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 P4HTMQ9NXG6 502 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 TRPS1Q9UHF7 1281 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 PLLPQ9Y342 182 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 RNF11Q9Y3C5 154 aa11.07□□□□□ -0.64
TRAFD1-209ENST00000552896 ARGFXA6NJG6 315 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FOXE1O00358 373 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 PEX12O00623 359 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 RGS16O15492 202 aaPredicted RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CTIFO43310 598 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 B3GALT2O43825 422 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 SCELO95171 688 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 B3GALT4O96024 378 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 HEXBP07686 556 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FHP07954 510 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FAM87AP0C7U9 286 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 RNH1P13489 461 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CPA3P15088 417 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 ACPPP15309 386 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 JAK1P23458 1154 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 TSFMP43897 325 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 MTTPP55157 894 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CDH13P55290 713 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 DDX39BQ13838 428 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 PCLAFQ15004 111 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 ZRSR2Q15696 482 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 TUBB8Q3ZCM7 444 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 DCAF10Q5QP82 559 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CEP85LQ5SZL2 805 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 KHDRBS2Q5VWX1 349 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 LIPMQ5VYY2 423 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FRG2Q64ET8 278 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FRMD7Q6ZUT3 714 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CHSY3Q70JA7 882 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 MILR1Q7Z6M3 343 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 CCDC63Q8NA47 563 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 OR4F6Q8NGB9 312 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 OR5T3Q8NGG3 340 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 TBC1D20Q96BZ9 403 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 PGM2Q96G03 612 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FER1L6-AS2Q96M78 137 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FRG2BQ96QU4 278 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 SERINC2Q96SA4 455 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 MTERF1Q99551 399 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 TBCDQ9BTW9 1192 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 SLC29A3Q9BZD2 475 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 VN1R1Q9GZP7 353 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 ING2Q9H160 280 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 GSTO2Q9H4Y5 243 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 SSU72Q9NP77 194 aaKnown RBP11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 LANCL2Q9NS86 450 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 OXSMQ9NWU1 459 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 FBXL4Q9UKA2 621 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 MKL2Q9ULH7 1088 aa11.06□□□□□ -0.64
TRAFD1-209ENST00000552896 A0A1B0GTL3 188 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 MAGEB17A8MXT2 336 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 H3BQF6 201 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 PSMD12O00232 456 aaPredicted RBP11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CHST10O43529 356 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 JRKO75564 520 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CEACAM4O75871 244 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 SEMA3DO95025 777 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 ENO1P06733 434 aaKnown RBP11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 SFTPCP11686 197 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CERS1P27544 350 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 RAP1GDS1P52306 607 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 EFNA3P52797 238 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 PLA2G16P53816 162 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 EMP2P54851 167 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 PKNOX1P55347 436 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 OLR1P78380 273 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 BTN3A2P78410 334 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 IFT88Q13099 833 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 KCNAB2Q13303 367 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CUL3Q13618 768 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 MINDY4Q4G0A6 757 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 TNFAIP8L3Q5GJ75 292 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CROCCQ5TZA2 2017 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 TMEM205Q6UW68 189 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 KIRREL2Q6UWL6 708 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 GPRIN3Q6ZVF9 776 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 LAPTM4BQ86VI4 370 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CA13Q8N1Q1 262 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 CLEC1AQ8NC01 280 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 ARMC2Q8NEN0 867 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 OR11G2Q8NGC1 345 aa11.05□□□□□ -0.64
TRAFD1-209ENST00000552896 TRPC4APQ8TEL6 797 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms