RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SIGLEC15Q6ZMC9 328 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ZNF704Q6ZNC4 412 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SLC24A5Q71RS6 500 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 C16orf62Q7Z3J2 963 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 KIAA1328Q86T90 577 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FJX1Q86VR8 437 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 LONP2Q86WA8 852 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 VRK3Q8IV63 474 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SLC25A41Q8N5S1 370 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FNDC5Q8NAU1 212 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SIDT2Q8NBJ9 832 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 CSNK2A3Q8NEV1 391 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 KCNG3Q8TAE7 436 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NDNFQ8TB73 568 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GPX8Q8TED1 209 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ADAMTS14Q8WXS8 1223 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GGHQ92820 318 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 RAB1CQ92928 201 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MCHR2Q969V1 340 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FBXL8Q96CD0 374 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ALS2CR12Q96Q35 445 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FRG2BQ96QU4 278 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CCNL2Q96S94 520 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 MSTO1Q9BUK6 570 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ALOXE3Q9BYJ1 711 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ANKRD60Q9BZ19 345 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 DPEP3Q9H4B8 488 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 LRRC4Q9HBW1 653 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ZNF160Q9HCG1 818 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GALNT9Q9HCQ5 603 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MRPL47Q9HD33 250 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 DNAJC4Q9NNZ3 241 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MRPL17Q9NRX2 175 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 GPR173Q9NS66 373 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ZDHHC18Q9NUE0 388 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 DDX28Q9NUL7 540 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 MBD2Q9UBB5 411 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 UXTQ9UBK9 157 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 PISDQ9UG56 409 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HMGXB4Q9UGU5 601 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 AMFRQ9UKV5 643 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TBC1D24Q9ULP9 559 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 RNF24Q9Y225 148 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MAP3K2Q9Y2U5 619 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 OR10H1Q9Y4A9 318 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NINLQ9Y2I6 1382 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HEPACAM2A8MVW5 462 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FAM157AC9JC47 383 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 H0YHG0 523 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HAS3O00219 553 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MDM4O15151 490 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TMPRSS11DO60235 418 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ACSL4O60488 711 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 BCAS1O75363 584 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 GMNNO75496 209 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CLN5O75503 358 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TOP3BO95985 862 aaKnown RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 LYNP07948 512 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ITGB6P18564 788 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 AXLP30530 894 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 LCN1P31025 176 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CCT8P50990 548 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ARHGDIAP52565 204 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ATP12AP54707 1039 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GSDMDP57764 484 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 CFHR1Q03591 330 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 DSC1Q08554 894 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MELKQ14680 651 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 USF2Q15853 346 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 BCL2A1Q16548 175 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ZC2HC1CQ53FD0 456 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 EFHC1Q5JVL4 640 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 FAM46CQ5VWP2 391 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TMEM268Q5VZI3 342 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SPECC1LQ69YQ0 1117 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 NIPAL3Q6P499 406 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 Q6ZPB1 254 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 CCDC190Q86UF4 302 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 VSTM4Q8IW00 320 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ARHGEF19Q8IW93 802 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 C16orf71Q8IYS4 520 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 ZNF683Q8IZ20 524 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ADGRF4Q8IZF3 695 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 B3GALNT2Q8NCR0 500 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 GJC3Q8NFK1 279 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 TBC1D16Q8TBP0 767 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 XAGE5Q8WWM1 108 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 HAS2Q92819 552 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 WBP2Q969T9 261 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 SLC47A1Q96FL8 570 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 COQ2Q96H96 371 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 ELMO2Q96JJ3 720 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 INPP4AQ96PE3 977 aaPredicted RBP3.95□□□□□ -1.78
USP44-208ENST00000552440 SIGLEC11Q96RL6 698 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 MLST8Q9BVC4 326 aa3.95□□□□□ -1.78
USP44-208ENST00000552440 RNF26Q9BY78 433 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms