RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 TBC1D20Q96BZ9 403 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 TRIM11Q96F44 468 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 PIH1D1Q9NWS0 290 aaKnown RBP12.32□□□□□ -0.44
SNRPF-203ENST00000551316 LAMP3Q9UQV4 416 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 CLDN16Q9Y5I7 305 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 ALPK2Q86TB3 2170 aa12.32□□□□□ -0.44
SNRPF-203ENST00000551316 CD8B2A6NJW9 211 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 AHRRA9YTQ3 701 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 OVOL3O00110 214 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 KPNA5O15131 536 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 CYP1A2P05177 515 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 AOAHP28039 575 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 PSMB4P28070 264 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 RPA3P35244 121 aaPredicted RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 ZNF704Q6ZNC4 412 aaPredicted RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 RTL4Q6ZR62 310 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 RFX6Q8HWS3 928 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 DEPDC4Q8N2C3 294 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 LRRC25Q8N386 305 aaPredicted RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 ZNF321PQ8N8H1 164 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 SGMS2Q8NHU3 365 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 TFB1MQ8WVM0 346 aaKnown RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 PDLIM2Q96JY6 352 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 GBA3Q9H227 469 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 ANKHQ9HCJ1 492 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 SPATA7Q9P0W8 599 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 LPAR3Q9UBY5 353 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 NDRG3Q9UGV2 375 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 GDF2Q9UK05 429 aaPredicted RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 CAMK2AQ9UQM7 478 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 SLC6A5Q9Y345 797 aa12.31□□□□□ -0.44
SNRPF-203ENST00000551316 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.31□□□□□ -0.44
SNRPF-203ENST00000551316 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
SNRPF-203ENST00000551316 CCDC162PA2VCL2 907 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 A8MXE2 369 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 H7BY64 318 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 TXNDC9O14530 226 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 CHST10O43529 356 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 PROSCO94903 275 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 SOD3P08294 240 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
SNRPF-203ENST00000551316 HK2P52789 917 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 PRDX1Q06830 199 aaKnown RBP12.3□□□□□ -0.44
SNRPF-203ENST00000551316 QSOX2Q6ZRP7 698 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 BTLAQ7Z6A9 289 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 SLC26A11Q86WA9 606 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 GPALPP1Q8IXQ4 340 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 TM4SF19Q96DZ7 209 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 PRAP1Q96NZ9 151 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MED18Q9BUE0 208 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 SACM1LQ9NTJ5 587 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MYOTQ9UBF9 498 aa12.3□□□□□ -0.44
SNRPF-203ENST00000551316 MATN4O95460 622 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 THBDP07204 575 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 PKMP14618 531 aaKnown RBP12.29□□□□□ -0.44
SNRPF-203ENST00000551316 GEMP55040 296 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 NAA25Q14CX7 972 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 MIDNQ504T8 468 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 KCTD11Q693B1 232 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 APTXQ7Z2E3 356 aaKnown RBP12.29□□□□□ -0.44
SNRPF-203ENST00000551316 LDB1Q86U70 411 aaPredicted RBP12.29□□□□□ -0.44
SNRPF-203ENST00000551316 RASGEF1CQ8N431 466 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 ASZ1Q8WWH4 475 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 NTNG2Q96CW9 530 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 VMP1Q96GC9 406 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNRPF-203ENST00000551316 ERGIC2Q96RQ1 377 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 CHODLQ9H9P2 273 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 ACKR4Q9NPB9 350 aa12.29□□□□□ -0.44
SNRPF-203ENST00000551316 PPIEQ9UNP9 301 aaKnown RBP12.29□□□□□ -0.44
SNRPF-203ENST00000551316 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 C4orf51C9J302 202 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 HS3ST1O14792 307 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 LCMT2O60294 686 aaKnown RBP12.28□□□□□ -0.44
SNRPF-203ENST00000551316 TNFSF13O75888 250 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 CCDC172P0C7W6 258 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 IDUAP35475 653 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 RPS4XP62701 263 aaKnown RBP12.28□□□□□ -0.44
SNRPF-203ENST00000551316 VLDLRP98155 873 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 POU6F1Q14863 301 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 FAM120AOSQ5T036 256 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 AFAP1L2Q8N4X5 818 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 ZNF611Q8N823 705 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 ZNF740Q8NDX6 193 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
SNRPF-203ENST00000551316 SMPDL3AQ92484 453 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 INTS12Q96CB8 462 aaKnown RBP12.28□□□□□ -0.44
SNRPF-203ENST00000551316 WDYHV1Q96HA8 205 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 ART5Q96L15 291 aa12.28□□□□□ -0.44
SNRPF-203ENST00000551316 SLC30A3Q99726 388 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms