RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 POLE3Q9NRF9 147 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ABCB8Q9NUT2 735 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 DCAF13Q9NV06 445 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 IMP3Q9NV31 184 aaKnown RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 FAM86C1Q9NVL1 165 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MIOSQ9NXC5 875 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 KCTD5Q9NXV2 234 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 PRR13Q9NZ81 148 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 RCOR3Q9P2K3 495 aaPredicted RBP5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 MGAT4AQ9UM21 535 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ING4Q9UNL4 249 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 SLC45A1Q9Y2W3 748 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 CMAHPQ9Y471 501 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ASB1Q9Y576 335 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 DNAJC15Q9Y5T4 150 aa5.09□□□□□ -1.59
LSM3P2-201ENST00000551246 ZNF646O15015 1829 aaPredicted RBP5.09□□□□□ -1.6
LSM3P2-201ENST00000551246 MYH9P35579 1960 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 A0A096LPI6 279 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 TRAV20A0A0B4J274 112 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 NEMP2A6NFY4 417 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ARGFXA6NJG6 315 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CLCA1A8K7I4 914 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 C19orf81C9J6K1 198 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF670-ZNF695F2Z2N8 137 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FZD9O00144 591 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 WNT11O96014 354 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CST1P01037 141 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PTHP01270 115 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 IL1AP01583 271 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ADRA2AP08913 450 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SULT1A3P0DMM9 295 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SULT1A4P0DMN0 295 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PIPP12273 146 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PRF1P14222 555 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 POU2F1P14859 743 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 HOXB8P17481 243 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 HOXB9P17482 250 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CYP2B6P20813 491 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FPR1P21462 350 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PRKACGP22612 351 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 IGFBP5P24593 272 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CYP2F1P24903 491 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 S100PP25815 95 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ITGB8P26012 769 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 C21orf33P30042 268 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GGT2P36268 569 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CRYBB2P43320 205 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MAN2A2P49641 1150 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 STARP49675 285 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 KPNA2P52292 529 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 RAG2P55895 527 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 TAS2R39P59534 338 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 DCDP81605 110 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 POU4F1Q01851 419 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CSTF3Q12996 717 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 RAB33AQ14088 237 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SEMA3AQ14563 771 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MXD4Q14582 209 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 VEPH1Q14D04 833 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SF3A2Q15428 464 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SGCAQ16586 387 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PFKFB4Q16877 469 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 KLHL22Q53GT1 634 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 FAM76BQ5HYJ3 339 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF678Q5SXM1 525 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 C10orf62Q5T681 223 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 B3GNTL1Q67FW5 361 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ARHGAP17Q68EM7 881 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 NCBP2-AS2Q69YL0 99 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 KIAA1211LQ6NV74 962 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 XRRA1Q6P2D8 792 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SPESP1Q6UW49 350 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SUSD1Q6UWL2 747 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CES3Q6UWW8 571 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 C6orf15Q6UXA7 325 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 DPP8Q6V1X1 898 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CEP68Q76N32 757 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 KIAA0907Q7Z7F0 614 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 KCNMB4Q86W47 210 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PSTKQ8IV42 348 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 LAX1Q8IWV1 398 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 MSRB3Q8IXL7 192 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SLC44A3Q8N4M1 653 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CHCHD4Q8N4Q1 142 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF655Q8N720 491 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 COLGALT1Q8NBJ5 622 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PLA2G15Q8NCC3 412 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 GMCL1P1Q8NEA9 526 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 SRFBP1Q8NEF9 429 aaKnown RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 OR1M1Q8NGA1 313 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 OR11H7Q8NGC8 314 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 OR5B17Q8NGF7 314 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 RXFP2Q8WXD0 754 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 CLEC4DQ8WXI8 215 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 UBE2FQ969M7 185 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ZNF669Q96BR6 464 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 ULK4Q96C45 1275 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 PGAP3Q96FM1 320 aaPredicted RBP5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 EXOC2Q96KP1 924 aa5.08□□□□□ -1.6
LSM3P2-201ENST00000551246 TEX37Q96LM6 180 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms