RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PLAC1Q9HBJ0 212 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 MAGEE1Q9HCI5 957 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 SMOXQ9NWM0 555 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 VPS18Q9P253 973 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 HEY2Q9UBP5 337 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 DNPEPQ9ULA0 475 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 KCNK6Q9Y257 313 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 HEMK1Q9Y5R4 338 aaPredicted RBP4.72□□□□□ -1.65
SCAF11-214ENST00000550893 ARL5AQ9Y689 179 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 CPAMD8Q8IZJ3 1885 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 HIVEP3Q5T1R4 2406 aa4.72□□□□□ -1.65
SCAF11-214ENST00000550893 USP9YO00507 2555 aaPredicted RBP4.71□□□□□ -1.65
SCAF11-214ENST00000550893 SPTAN1Q13813 2472 aaKnown RBP4.71□□□□□ -1.65
SCAF11-214ENST00000550893 CSMD1Q96PZ7 3565 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 A0A1W2PQ67 120 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CACNB4O00305 520 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SPOPO43791 374 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A9O60656 530 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PLAUP00749 431 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 C9P02748 559 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ANXA6P08133 673 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ETS1P14921 441 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A6P19224 532 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A1P22309 533 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A4P22310 534 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 GABRB3P28472 473 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SLC5A2P31639 672 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A3P35503 534 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A5P35504 534 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 HMGCLP35914 325 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ACTR1BP42025 376 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SSR1P43307 286 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 NR2C2P49116 596 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CLCNKAP51800 687 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ACTR1AP61163 376 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 DMPKQ09013 629 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 XRCC4Q13426 336 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SPARCL1Q14515 664 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ELOCQ15369 112 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CHRNA6Q15825 494 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ANKRD20A2Q5SQ80 823 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 GPRC6AQ5T6X5 926 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ANKRD20A1Q5TYW2 823 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ANKRD20A3Q5VUR7 823 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CRYBG3Q68DQ2 2970 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 IYDQ6PHW0 289 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CERS6Q6ZMG9 384 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 RBM44Q6ZP01 1051 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 MARK2Q7KZI7 788 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TIPARPQ7Z3E1 657 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ARHGAP22Q7Z5H3 698 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ANKRD13BQ86YJ7 626 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TMTC1Q8IUR5 882 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TRAM1L1Q8N609 369 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 RASGEF1AQ8N9B8 481 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SPC24Q8NBT2 197 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CCNYQ8ND76 341 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 DDHD1Q8NEL9 900 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 OR13J1Q8NGT2 312 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 FLVCR1-AS1Q8TAF5 88 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 LKAAEAR1Q8TD35 194 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 DTX3LQ8TDB6 740 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TFB1MQ8WVM0 346 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 RSC1A1Q92681 617 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 NAT6Q93015 286 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SKA1Q96BD8 255 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 RMDN2Q96LZ7 410 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PPM1MQ96MI6 270 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 BAG1Q99933 345 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 WDR83Q9BRX9 315 aaKnown RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 FICDQ9BVA6 458 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TBC1D10AQ9BXI6 508 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PCDHAC1Q9H158 963 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 OR2AG1Q9H205 316 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A7Q9HAW7 530 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A10Q9HAW8 530 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 UGT1A8Q9HAW9 530 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 ARNT2Q9HBZ2 717 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 APMAPQ9HDC9 416 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 BPIFA1Q9NP55 256 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PRDM8Q9NQV8 689 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PHPT1Q9NRX4 125 aaPredicted RBP4.71□□□□□ -1.66
SCAF11-214ENST00000550893 OCIAD1Q9NX40 245 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 DONSONQ9NYP3 566 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SMARCAL1Q9NZC9 954 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 SEPT10Q9P0V9 454 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 LCMT1Q9UIC8 334 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 MAN2B2Q9Y2E5 1009 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 TTLL3Q9Y4R7 772 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 PRSS21Q9Y6M0 314 aa4.71□□□□□ -1.66
SCAF11-214ENST00000550893 CCDC187A0A096LP49 1063 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 TCRBV7S3A2A0A539 114 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 MACROD2A1Z1Q3 448 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 RGSL1A5PLK6 1076 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 KRT87PA6NCN2 255 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 C5orf60A6NFR6 353 aa4.7□□□□□ -1.66
SCAF11-214ENST00000550893 NEMP2A6NFY4 417 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms