RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ADAM23O75077 832 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 KHDRBS3O75525 346 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 ITGAMP11215 1152 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 JUPP14923 745 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 SELPP16109 830 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 RCVRNP35243 200 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 STAT5AP42229 794 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 DGKGP49619 791 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 HK3P52790 923 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 CXCR4P61073 352 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 UGT8Q16880 541 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 IER5LQ5T953 404 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 RGMBQ6NW40 437 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 BTLAQ7Z6A9 289 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 NPAS4Q8IUM7 802 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 CHCHD4Q8N4Q1 142 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 KLHDC9Q8NEP7 349 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 HMGCLL1Q8TB92 370 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 PIGKQ92643 395 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 FERD3LQ96RJ6 166 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 C3orf14Q9HBI5 128 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 FBXW2Q9UKT8 454 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 MICAL3Q7RTP6 2002 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 PI15O43692 258 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 ITGBL1O95965 494 aaPredicted RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 STATHP02808 62 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 PIM1P11309 404 aaPredicted RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 HPGDP15428 266 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 RPL4P36578 427 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 SOX3P41225 446 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 RPL34P49207 117 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 PNLIPRP1P54315 467 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 GP2P55259 537 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 AQP6Q13520 282 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 SF3B4Q15427 424 aaKnown RBP eCLIP9.84□□□□□ -0.831e-12■■■■■ 41.6
SMARCC2-209ENST00000550164 BCL7AQ4VC05 210 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 NCEH1Q6PIU2 408 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 RBM23Q86U06 439 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 TIGD4Q8IY51 512 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 C2orf15Q8WU43 125 aaKnown RBP9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 CHIAQ9BZP6 476 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 KCNN2Q9H2S1 579 aa9.84□□□□□ -0.83
SMARCC2-209ENST00000550164 TBC1D3BA6NDS4 549 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 FAM86C2PA6NEL3 165 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 FHP07954 510 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 NUDT7P0C024 238 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 IL7P13232 177 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SLC6A4P31645 630 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TGFBR1P36897 503 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CDKN2CP42773 168 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 RGS6P49758 472 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 AGAP6Q5VW22 663 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 LHFPL3Q86UP9 236 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 DENND6BQ8NEG7 585 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 B3GNT7Q8NFL0 401 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SUSD6Q92537 303 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SMG7Q92540 1137 aaKnown RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 AGAP4Q96P64 663 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TRMT61BQ9BVS5 477 aaKnown RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SLITRK2Q9H156 845 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 BEX1Q9HBH7 125 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 EIF3KQ9UBQ5 218 aaKnown RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 GRIP1Q9Y3R0 1128 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CFAP20Q9Y6A4 193 aaKnown RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ZNF780BQ9Y6R6 833 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 C2orf78A6NCI8 922 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 JRKO75564 520 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 OAZ2O95190 189 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CAPNS1P04632 268 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ATF4P18848 351 aaPredicted RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SSTR4P31391 388 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 MAP2K3P46734 347 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CCR4P51679 360 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SMSP52788 366 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CRISP3P54108 245 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 MLLT1Q03111 559 aaPredicted RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 LGALS3BPQ08380 585 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TRIM71Q2Q1W2 868 aaKnown RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ARL9Q6T311 187 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 IQCHQ86VS3 1027 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ELMOD2Q8IZ81 293 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 Q8N402 240 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 NEURL2Q9BR09 285 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CPPED1Q9BRF8 314 aaPredicted RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 BOLA1Q9Y3E2 137 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 Q9Y3F1 56 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 PRSS21Q9Y6M0 314 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TRAV6A0A075B6T7 132 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TCRBV5S2A0A599 114 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 INMT-MINDY4F8WBC2 141 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 TIA1P31483 386 aaKnown RBP eCLIP9.83□□□□□ -0.844e-9■■■■■ 31
SMARCC2-209ENST00000550164 GGT2P36268 569 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 HTR2BP41595 481 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 CDH11P55287 796 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 FBXW4P57775 412 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 SGCGQ13326 291 aa9.83□□□□□ -0.84
SMARCC2-209ENST00000550164 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms