RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 STRA8Q7Z7C7 330 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 PLD3Q8IV08 490 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 MYO1HQ8N1T3 1032 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 TMEM178AQ8NBL3 297 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 CAMKVQ8NCB2 501 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 OR51Q1Q8NH59 317 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 FAM57AQ8TBR7 257 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 M1APQ8TC57 530 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 FAM45AQ8TCE6 357 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 PDLIM5Q96HC4 596 aaKnown RBP11.43□□□□□ -0.58
DDX54-206ENST00000549271 ZNF354BQ96LW1 612 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 SAYSD1Q9NPB0 183 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 CCDC177Q9NQR7 707 aaPredicted RBP11.43□□□□□ -0.58
DDX54-206ENST00000549271 ABCF3Q9NUQ8 709 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 ZFATQ9P243 1243 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 EDARQ9UNE0 448 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 SH2B3Q9UQQ2 575 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 L3MBTL1Q9Y468 752 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 SCN3AQ9NY46 2000 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 DNAJC13O75165 2243 aa11.43□□□□□ -0.58
DDX54-206ENST00000549271 A8MUI8 341 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CXorf49A8MYA2 514 aaPredicted RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 EIF3HO15372 352 aaKnown RBP eCLIP11.42□□□□□ -0.58
DDX54-206ENST00000549271 SEC24DO94855 1032 aaPredicted RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 C1QAP02745 245 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CD46P15529 392 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 SSTR1P30872 391 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 HOXC12P31275 282 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PTGER1P34995 402 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 XCR1P46094 333 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 DGKQP52824 942 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 TAS2R39P59534 338 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CALCOCO2Q13137 446 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PDAP1Q13442 181 aaKnown RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 NAE1Q13564 534 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 EXT1Q16394 746 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 FCRLBQ6BAA4 426 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 SPINK14Q6IE38 97 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 AGTRAPQ6RW13 159 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 ZDHHC24Q6UX98 284 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 LANCL3Q6ZV70 420 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PRSS41Q7RTY9 318 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 ANKRD37Q7Z713 158 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CD163Q86VB7 1156 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 SLC26A11Q86WA9 606 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PALM2Q8IXS6 379 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CLYBLQ8N0X4 340 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 LGI4Q8N135 537 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 FAM98AQ8NCA5 519 aaKnown RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 PLPP5Q8NEB5 264 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 PYROXD1Q8WU10 500 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 NPAS2Q99743 824 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 UTP23Q9BRU9 249 aaKnown RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 SARGQ9BW04 601 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 SGPP1Q9BX95 441 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 ATG10Q9H0Y0 220 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 CLEC4MQ9H2X3 399 aaPredicted RBP11.42□□□□□ -0.58
DDX54-206ENST00000549271 MMP25Q9NPA2 562 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 ANKRD10Q9NXR5 420 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 LRFN1Q9P244 771 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 SLC22A7Q9Y694 548 aa11.42□□□□□ -0.58
DDX54-206ENST00000549271 IGHV3-20A0A0C4DH32 117 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 FAM95CA0A1B0GW59 222 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 NEURL1O76050 574 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 SP1P08047 785 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 NPPBP16860 134 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 ZNF24P17028 368 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 CCND1P24385 295 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 PTGS2P35354 604 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 PLTPP55058 493 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 DLX5P56178 289 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 GPX6P59796 221 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 TBPL1P62380 186 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 ZNF460Q14592 562 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 MEP1AQ16819 746 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 BTBD16Q32M84 506 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 MINDY4Q4G0A6 757 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 SBSNQ6UWP8 590 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 CAPN12Q6ZSI9 719 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 CYS1Q717R9 158 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 C17orf64Q86WR6 236 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 CRLF3Q8IUI8 442 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 CCDC71Q8IV32 467 aaPredicted RBP11.41□□□□□ -0.58
DDX54-206ENST00000549271 RPRMLQ8N4K4 120 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 AFAP1L2Q8N4X5 818 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 OR56A3Q8NH54 315 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 FBXO25Q8TCJ0 367 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 RND1Q92730 232 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 OR1F2PQ96R84 312 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 GPATCH1Q9BRR8 931 aaKnown RBP11.41□□□□□ -0.58
DDX54-206ENST00000549271 RHOJQ9H4E5 214 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 ANKHQ9HCJ1 492 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 RASSF1Q9NS23 344 aa11.41□□□□□ -0.58
DDX54-206ENST00000549271 MTO1Q9Y2Z2 717 aaKnown RBP11.41□□□□□ -0.58
DDX54-206ENST00000549271 UTP11Q9Y3A2 253 aaKnown RBP11.41□□□□□ -0.58
DDX54-206ENST00000549271 FAM159BA6NKW6 160 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 MAGEB17A8MXT2 336 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 SGK494L7N484 410 aa11.4□□□□□ -0.58
DDX54-206ENST00000549271 CDC7O00311 574 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms