RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 RHBGQ9H310 441 aa15.38■□□□□ 0.05
SSH1-208ENST00000548522 IARS2Q9NSE4 1012 aaKnown RBP15.38■□□□□ 0.05
SSH1-208ENST00000548522 COQ3Q9NZJ6 369 aa15.38■□□□□ 0.05
SSH1-208ENST00000548522 ZNF223Q9UK11 482 aaPredicted RBP15.38■□□□□ 0.05
SSH1-208ENST00000548522 RNF6Q9Y252 685 aa15.38■□□□□ 0.05
SSH1-208ENST00000548522 MAD1L1Q9Y6D9 718 aa15.38■□□□□ 0.05
SSH1-208ENST00000548522 COMMD10Q9Y6G5 202 aa15.38■□□□□ 0.05
SSH1-208ENST00000548522 MAP1AP78559 2803 aaPredicted RBP15.38■□□□□ 0.05
SSH1-208ENST00000548522 TRBV11-1A0A0K0K1C0 115 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 TCRBV16S1A1N1A0A5B0 115 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 PRMT3O60678 531 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 PDE9AO76083 593 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 MLNP12872 115 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 TFEBP19484 476 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 SP140Q13342 867 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 PWP1Q13610 501 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 EMC4Q5J8M3 183 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 ARMC3Q5W041 872 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 EMBQ6PCB8 327 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 C16orf47Q6ZP98 133 aaPredicted RBP15.37■□□□□ 0.05
SSH1-208ENST00000548522 CCDC71Q8IV32 467 aaPredicted RBP15.37■□□□□ 0.05
SSH1-208ENST00000548522 IFT20Q8IY31 132 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 APCDD1LQ8NCL9 501 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 OR52N2Q8NGI0 321 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 UTP15Q8TED0 518 aaKnown RBP15.37■□□□□ 0.05
SSH1-208ENST00000548522 SNF8Q96H20 258 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 RUNDC3BQ96NL0 473 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 SARGQ9BW04 601 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 FAM129AQ9BZQ8 928 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 AICDAQ9GZX7 198 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 KLHL31Q9H511 634 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 XAB2Q9HCS7 855 aaKnown RBP15.37■□□□□ 0.05
SSH1-208ENST00000548522 IKZF3Q9UKT9 509 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 KLF13Q9Y2Y9 288 aaPredicted RBP15.37■□□□□ 0.05
SSH1-208ENST00000548522 VPS13CQ709C8 3753 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 GTF3C1Q12789 2109 aa15.37■□□□□ 0.05
SSH1-208ENST00000548522 TRBC2A0A5B9 178 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 MAGEB16A2A368 324 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 PINLYPA6NC86 204 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 PEX1O43933 1283 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 TOXO94900 526 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 CCND1P24385 295 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 PPP2R1BP30154 601 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 SCTRP47872 440 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 CYP4Z2PQ8N1L4 340 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 MYO1HQ8N1T3 1032 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 ARMC10Q8N2F6 343 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 ANKRD53Q8N9V6 530 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 POGLUT1Q8NBL1 392 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 C2CD4AQ8NCU7 369 aaPredicted RBP15.36■□□□□ 0.05
SSH1-208ENST00000548522 MCUQ8NE86 351 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 OR56A3Q8NH54 315 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 NT5CQ8TCD5 201 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 MAIP1Q8WWC4 291 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 SREK1Q8WXA9 508 aaKnown RBP15.36■□□□□ 0.05
SSH1-208ENST00000548522 NEIL2Q969S2 332 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 SIGLEC10Q96LC7 697 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 HAUS8Q9BT25 410 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 DEFB126Q9BYW3 111 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 DEPPQ9NTK1 212 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 ARL15Q9NXU5 204 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 TNFRSF10DQ9UBN6 386 aa15.36■□□□□ 0.05
SSH1-208ENST00000548522 NIPBLQ6KC79 2804 aaeCLIP15.35■□□□□ 0.05
SSH1-208ENST00000548522 A0A0G2JMM0 328 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 GOLGA6L10A0A0M3HER8 536 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 A0A1W2PPB8 328 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 A0A1W2PRS3 328 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 KIR3DP1A8MWS1 328 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 TGFBR3LH3BV60 316 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 SLC16A5O15375 505 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 PRKNO60260 465 aaPredicted RBP15.35■□□□□ 0.05
SSH1-208ENST00000548522 BANF1O75531 89 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 MYO1DO94832 1006 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 MSX1P28360 303 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 RGS4P49798 205 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 ART1P52961 327 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 RGS1Q08116 209 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 LRRC8EQ6NSJ5 796 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 UGT3A1Q6NUS8 523 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 ABHD13Q7L211 337 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 EID3Q8N140 333 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 ZFP62Q8NB50 900 aaPredicted RBP15.35■□□□□ 0.05
SSH1-208ENST00000548522 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.35■□□□□ 0.05
SSH1-208ENST00000548522 C16orf52Q8NHV5 167 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 AENQ8WTP8 325 aaKnown RBP15.35■□□□□ 0.05
SSH1-208ENST00000548522 SLC5A11Q8WWX8 675 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 CAVIN3Q969G5 261 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 POM121Q96HA1 1249 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 SEC16BQ96JE7 1060 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 FAM167BQ9BTA0 163 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 PRDM9Q9NQV7 894 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 PLSCR2Q9NRY7 297 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 ZFATQ9P243 1243 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 ZFP69BQ9UJL9 534 aa15.35■□□□□ 0.05
SSH1-208ENST00000548522 FCHO1O14526 889 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 ITGA10O75578 1167 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 GUCA1CO95843 209 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 CHRNB4P30926 498 aa15.34■□□□□ 0.05
SSH1-208ENST00000548522 HNRNPFP52597 415 aaKnown RBP15.34■□□□□ 0.05
SSH1-208ENST00000548522 REEP5Q00765 189 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms