RNA–Protein interactions for RNA: ENST00000546411.6

CUX1-211, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-211ENST00000546411 SPRTNQ9H040 489 aaPredicted RBP15.07■□□□□ 0
CUX1-211ENST00000546411 POFUT2Q9Y2G5 429 aa15.07■□□□□ 0
CUX1-211ENST00000546411 DOCK1Q14185 1865 aa15.07■□□□□ 0
CUX1-211ENST00000546411 H0YJX3 145 aa15.07■□□□□ 0
CUX1-211ENST00000546411 TAF4O00268 1085 aa15.07■□□□□ 0
CUX1-211ENST00000546411 PLOD3O60568 738 aa15.07■□□□□ 0
CUX1-211ENST00000546411 STSP08842 583 aa15.07■□□□□ 0
CUX1-211ENST00000546411 NUDT7P0C024 238 aa15.07■□□□□ 0
CUX1-211ENST00000546411 CSNK2A2P19784 350 aaPredicted RBP15.07■□□□□ 0
CUX1-211ENST00000546411 LARS2Q15031 903 aaKnown RBP15.07■□□□□ 0
CUX1-211ENST00000546411 DEPDC7Q96QD5 511 aa15.07■□□□□ 0
CUX1-211ENST00000546411 KXD1Q9BQD3 176 aa15.07■□□□□ 0
CUX1-211ENST00000546411 DOHHQ9BU89 302 aa15.07■□□□□ 0
CUX1-211ENST00000546411 LMAN2LQ9H0V9 348 aa15.07■□□□□ 0
CUX1-211ENST00000546411 HEBP1Q9NRV9 189 aa15.07■□□□□ 0
CUX1-211ENST00000546411 MS4A12Q9NXJ0 267 aa15.07■□□□□ 0
CUX1-211ENST00000546411 COMMD3Q9UBI1 195 aa15.07■□□□□ 0
CUX1-211ENST00000546411 TLR4O00206 839 aa15.06■□□□□ 0
CUX1-211ENST00000546411 OR12D1P0DN82 309 aa15.06■□□□□ 0
CUX1-211ENST00000546411 MYBPC3Q14896 1274 aa15.06■□□□□ 0
CUX1-211ENST00000546411 REEP3Q6NUK4 255 aa15.06■□□□□ 0
CUX1-211ENST00000546411 TMPRSS11AQ6ZMR5 421 aa15.06■□□□□ 0
CUX1-211ENST00000546411 RNF111Q6ZNA4 994 aa15.06■□□□□ 0
CUX1-211ENST00000546411 RAD9AQ99638 391 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ADAM30Q9UKF2 790 aa15.06■□□□□ 0
CUX1-211ENST00000546411 PCDHA9Q9Y5H5 950 aa15.06■□□□□ 0
CUX1-211ENST00000546411 MPC1LP0DKB6 136 aa15.06■□□□□ 0
CUX1-211ENST00000546411 RPS3P23396 243 aaKnown RBP eCLIP15.06■□□□□ 0
CUX1-211ENST00000546411 MPIP34949 423 aa15.06■□□□□ 0
CUX1-211ENST00000546411 GRIA2P42262 883 aa15.06■□□□□ 0
CUX1-211ENST00000546411 CAPZA2P47755 286 aa15.06■□□□□ 0
CUX1-211ENST00000546411 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
CUX1-211ENST00000546411 BIKQ13323 160 aa15.06■□□□□ 0
CUX1-211ENST00000546411 C5orf22Q49AR2 442 aa15.06■□□□□ 0
CUX1-211ENST00000546411 HMBOX1Q6NT76 420 aa15.06■□□□□ 0
CUX1-211ENST00000546411 SIPA1Q96FS4 1042 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ZNF583Q96ND8 569 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ALAS2P22557 587 aa15.06■□□□□ 0
CUX1-211ENST00000546411 HYAL2Q12891 473 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ELAVL3Q14576 367 aaKnown RBP15.06■□□□□ 0
CUX1-211ENST00000546411 SMN1Q16637 294 aaKnown RBP15.06■□□□□ 0
CUX1-211ENST00000546411 MINDY4Q4G0A6 757 aa15.06■□□□□ 0
CUX1-211ENST00000546411 FAM26DQ5JW98 314 aa15.06■□□□□ 0
CUX1-211ENST00000546411 FAM98AQ8NCA5 519 aaKnown RBP15.06■□□□□ 0
CUX1-211ENST00000546411 HMGB4Q8WW32 186 aa15.06■□□□□ 0
CUX1-211ENST00000546411 PCBD2Q9H0N5 130 aa15.06■□□□□ 0
CUX1-211ENST00000546411 OLAHQ9NV23 265 aa15.06■□□□□ 0
CUX1-211ENST00000546411 P2RX2Q9UBL9 471 aa15.06■□□□□ 0
CUX1-211ENST00000546411 HCN4Q9Y3Q4 1203 aa15.06■□□□□ 0
CUX1-211ENST00000546411 SLC35F4A4IF30 521 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ZNF12P17014 697 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ITPKBP27987 946 aa15.06■□□□□ 0
CUX1-211ENST00000546411 DMPKQ09013 629 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ZNF155Q12901 538 aaPredicted RBP15.06■□□□□ 0
CUX1-211ENST00000546411 NFATC3Q12968 1075 aa15.06■□□□□ 0
CUX1-211ENST00000546411 GALNT7Q86SF2 657 aa15.06■□□□□ 0
CUX1-211ENST00000546411 SLC5A8Q8N695 610 aa15.06■□□□□ 0
CUX1-211ENST00000546411 IPCEF1Q8WWN9 437 aaPredicted RBP15.06■□□□□ 0
CUX1-211ENST00000546411 FAM210AQ96ND0 272 aa15.06■□□□□ 0
CUX1-211ENST00000546411 ITPAQ9BY32 194 aa15.06■□□□□ 0
CUX1-211ENST00000546411 CCDC182A6NF36 153 aa15.05■□□□□ 0
CUX1-211ENST00000546411 CCNKO75909 580 aa15.05■□□□□ 0
CUX1-211ENST00000546411 LATS1O95835 1130 aa15.05■□□□□ 0
CUX1-211ENST00000546411 LCKP06239 509 aa15.05■□□□□ 0
CUX1-211ENST00000546411 ZNF630Q2M218 657 aaPredicted RBP15.05■□□□□ 0
CUX1-211ENST00000546411 NDEL1Q9GZM8 345 aa15.05■□□□□ 0
CUX1-211ENST00000546411 HEPACAM2A8MVW5 462 aa15.05■□□□□ -0
CUX1-211ENST00000546411 PEX11BO96011 259 aa15.05■□□□□ -0
CUX1-211ENST00000546411 DDX6P26196 483 aaKnown RBP eCLIP15.05■□□□□ -0
CUX1-211ENST00000546411 CDKN2CP42773 168 aa15.05■□□□□ -0
CUX1-211ENST00000546411 STXBP1P61764 594 aaKnown RBP15.05■□□□□ -0
CUX1-211ENST00000546411 MOGQ16653 247 aa15.05■□□□□ -0
CUX1-211ENST00000546411 RUNDC3AQ59EK9 446 aa15.05■□□□□ -0
CUX1-211ENST00000546411 CHMP1BQ7LBR1 199 aa15.05■□□□□ -0
CUX1-211ENST00000546411 DCP2Q8IU60 420 aaKnown RBP15.05■□□□□ -0
CUX1-211ENST00000546411 OR9Q2Q8NGE9 314 aa15.05■□□□□ -0
CUX1-211ENST00000546411 CD300AQ9UGN4 299 aa15.05■□□□□ -0
CUX1-211ENST00000546411 RNF6Q9Y252 685 aa15.05■□□□□ -0
CUX1-211ENST00000546411 HAT1O14929 419 aa15.05■□□□□ -0
CUX1-211ENST00000546411 CACNG3O60359 315 aa15.05■□□□□ -0
CUX1-211ENST00000546411 F11P03951 625 aa15.05■□□□□ -0
CUX1-211ENST00000546411 PCSK6P29122 969 aa15.05■□□□□ -0
CUX1-211ENST00000546411 PGDP52209 483 aa15.05■□□□□ -0
CUX1-211ENST00000546411 ZNF311Q5JNZ3 666 aa15.05■□□□□ -0
CUX1-211ENST00000546411 Q6ZPB1 254 aaPredicted RBP15.05■□□□□ -0
CUX1-211ENST00000546411 HTR3DQ70Z44 454 aa15.05■□□□□ -0
CUX1-211ENST00000546411 CENPSQ8N2Z9 138 aa15.05■□□□□ -0
CUX1-211ENST00000546411 COX18Q8N8Q8 333 aa15.05■□□□□ -0
CUX1-211ENST00000546411 PIGXQ8TBF5 258 aa15.05■□□□□ -0
CUX1-211ENST00000546411 RASSF5Q8WWW0 418 aa15.05■□□□□ -0
CUX1-211ENST00000546411 ASB11Q8WXH4 323 aa15.05■□□□□ -0
CUX1-211ENST00000546411 BARD1Q99728 777 aaKnown RBP15.05■□□□□ -0
CUX1-211ENST00000546411 NTMT1Q9BV86 223 aa15.05■□□□□ -0
CUX1-211ENST00000546411 DCAF13Q9NV06 445 aaKnown RBP15.05■□□□□ -0
CUX1-211ENST00000546411 GIN1Q9NXP7 522 aa15.05■□□□□ -0
CUX1-211ENST00000546411 STMN3Q9NZ72 180 aa15.05■□□□□ -0
CUX1-211ENST00000546411 TMEM9Q9P0T7 183 aa15.05■□□□□ -0
CUX1-211ENST00000546411 ABCG2Q9UNQ0 655 aa15.05■□□□□ -0
CUX1-211ENST00000546411 LRRC37AA6NMS7 1700 aa15.04■□□□□ -0
CUX1-211ENST00000546411 H3BMQ9 156 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms