RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SIX1Q15475 284 aaPredicted RBP14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 ITPRIPL1Q6GPH6 555 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 OR9A1PQ8NGU1 263 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 OR6P1Q8NGX9 317 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 GSDMBQ8TAX9 411 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 ASB15Q8WXK1 588 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 PIK3IP1Q96FE7 263 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 RBM24Q9BX46 236 aaKnown RBP14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 NECTIN3Q9NQS3 549 aa14.2□□□□□ -0.14
CLSTN3-216ENST00000545663 ROS1P08922 2347 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 MROH6A6NGR9 719 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 CHST10O43529 356 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 PSMA3P25788 255 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 CCNFP41002 786 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 ADARP55265 1226 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 TFDP2Q14188 446 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 PRPSAP1Q14558 356 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 TMED2Q15363 201 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 HYAL4Q2M3T9 481 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 ANKRD20A2Q5SQ80 823 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 ANKRD20A1Q5TYW2 823 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 ANKRD20A3Q5VUR7 823 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 C11orf63Q6NUN7 778 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 FAM47EQ6ZV65 393 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 LUZP2Q86TE4 346 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 MEIOBQ8N635 442 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 FBXO15Q8NCQ5 510 aaPredicted RBP14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 B3GNT7Q8NFL0 401 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 HS3ST6Q96QI5 342 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 TSSK1BQ9BXA7 367 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 REG4Q9BYZ8 158 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 UTP6Q9NYH9 597 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 SLC2A6Q9UGQ3 507 aa14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 REXO2Q9Y3B8 237 aaKnown RBP14.19□□□□□ -0.14
CLSTN3-216ENST00000545663 TCRBV16S1A1N1A0A5B0 115 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 A8MV72 311 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 WWP2O00308 870 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 MYO1DO94832 1006 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 GOT2P00505 430 aaKnown RBP14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 IL10P22301 178 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 CTSSP25774 331 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 ODF2Q5BJF6 829 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 WIPI1Q5MNZ9 446 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 LRRC38Q5VT99 294 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 KCTD11Q693B1 232 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF534Q76KX8 674 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 SLC26A11Q86WA9 606 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 LACC1Q8IV20 430 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 OR13J1Q8NGT2 312 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 IGFBPL1Q8WX77 278 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 TM4SF19Q96DZ7 209 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 SCYL1Q96KG9 808 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 ALS2CR12Q96Q35 445 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 PKP4Q99569 1192 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 DESI2Q9BSY9 194 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 AMBRA1Q9C0C7 1298 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 WIF1Q9Y5W5 379 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 CR1P17927 2039 aa14.18□□□□□ -0.14
CLSTN3-216ENST00000545663 KCNE1BA0A087WTH5 132 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 IGKV3D-11A0A0A0MRZ8 115 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 AHRRA9YTQ3 701 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 H7C0C1 242 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 CTIFO43310 598 aaKnown RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF354AO60765 605 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 CCL3P10147 92 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 PPP2R1BP30154 601 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 PIGAP37287 484 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 COILP38432 576 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 ATP5OP48047 213 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 PNLIPRP1P54315 467 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 ATP5J2P56134 94 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 FOXF2Q12947 444 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 ANKRD20A4Q4UJ75 823 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 C20orf204Q6ZNR8 217 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 NCLNQ969V3 563 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 RASL10BQ96S79 203 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 AARSD1Q9BTE6 412 aaKnown RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 LRTM1Q9HBL6 345 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 ZNF701Q9NV72 531 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 FEZ2Q9UHY8 353 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 PPP2R2CQ9Y2T4 447 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 PCDHGB3Q9Y5G1 929 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 NCKAP5O14513 1909 aa14.17□□□□□ -0.14
CLSTN3-216ENST00000545663 E7ENX8 843 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 F8W8V4 182 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 SMAPO00193 183 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 SPOPO43791 374 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 KIF5CO60282 957 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 LCMT2O60294 686 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 CCNDBP1O95273 360 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 MATN4O95460 622 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 PAX1P15863 534 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 OPRM1P35372 400 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 GPR143P51810 404 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 TAP2Q03519 686 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 VEZF1Q14119 521 aa14.16□□□□□ -0.14
CLSTN3-216ENST00000545663 CLEC12BQ2HXU8 276 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms