RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 CFAP73A6NFT4 308 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 A8MU76 341 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SH3BP5O60239 455 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 LMNAP02545 664 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 IL3P08700 152 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 CD1EP15812 388 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 KIR3DL1P43629 444 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ZFP36L2P47974 494 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 MTTPP55157 894 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SKP1P63208 163 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 BTN3A2P78410 334 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 KLC1Q07866 573 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 C2orf80Q0P641 193 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SLC9A5Q14940 896 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 CSRP2Q16527 193 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 NDUFA9Q16795 377 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 AASDHQ4L235 1098 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 TCTE1Q5JU00 501 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SPANXN4Q5MJ08 99 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 WASHC2DQ5SRD0 308 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 FAM71E1Q6IPT2 247 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ASRGL1Q7L266 308 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 RIMKLAQ8IXN7 391 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ZCCHC7Q8N3Z6 543 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ACOT4Q8N9L9 421 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 OR4D9Q8NGE8 314 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 OR8K5Q8NH50 307 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 MCUR1Q96AQ8 359 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 VPS33AQ96AX1 596 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ROPN1LQ96C74 230 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 MTERF3Q96E29 417 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM74Q96NL1 305 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 RAB3IPQ96QF0 476 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 FAIM2Q9BWQ8 316 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ZNF768Q9H5H4 540 aaKnown RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 REEP4Q9H6H4 257 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 RMND5AQ9H871 391 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 LHX9Q9NQ69 397 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 MIEF1Q9NQG6 463 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 TAS2R1Q9NYW7 299 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
SCARB1-209ENST00000545305 ATXN7L1Q9ULK2 861 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-209ENST00000545305 COL5A1P20908 1838 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 C4orf51C9J302 202 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ANKRD65E5RJM6 399 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 FBP2O00757 339 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 B3GALT2O43825 422 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 SCELO95171 688 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 PGRP06401 933 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 GP1BAP07359 652 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ANKRD34CP0C6C1 535 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 FAM58BPP0C7Q3 252 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ALOX12P18054 663 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ITGAXP20702 1163 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 CERS1P27544 350 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 DGKQP52824 942 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 SLC25A3Q00325 362 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 SLAMF1Q13291 335 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 NFYCQ13952 458 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 UGT8Q16880 541 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 PRTGQ2VWP7 1150 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 CPTPQ5TA50 214 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 NIPAL1Q6NVV3 410 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 HACD2Q6Y1H2 254 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 GPR180Q86V85 440 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 D2HGDHQ8N465 521 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 KIF2BQ8N4N8 673 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 TTC29Q8NA56 475 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 KLHL6Q8WZ60 621 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 OR52E6Q96RD3 313 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 SERINC2Q96SA4 455 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 WDR41Q9HAD4 459 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ANKHQ9HCJ1 492 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 FAM120CQ9NX05 1096 aaKnown RBP13.09□□□□□ -0.31
SCARB1-209ENST00000545305 ATP6V1HQ9UI12 483 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 SLC22A7Q9Y694 548 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
SCARB1-209ENST00000545305 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
SCARB1-209ENST00000545305 DLL1O00548 723 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms