RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 TMEM160Q9NX00 188 aa6.73□□□□□ -1.33
COPA-207ENST00000545284 SPRR3Q9UBC9 169 aa6.73□□□□□ -1.33
COPA-207ENST00000545284 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.73□□□□□ -1.33
COPA-207ENST00000545284 MMACHCQ9Y4U1 282 aa6.73□□□□□ -1.33
COPA-207ENST00000545284 ANK3Q12955 4377 aaKnown RBP6.73□□□□□ -1.33
COPA-207ENST00000545284 CUBNO60494 3623 aa6.73□□□□□ -1.33
COPA-207ENST00000545284 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 CHD3Q12873 2000 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 A0A1B0GTH6 734 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 URADA6NGE7 173 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ERI2A8K979 691 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 EEF1E1-BLOC1S5C9J1V9 151 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 PFDN6O15212 129 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 CTIFO43310 598 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 EEF1E1O43324 174 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 CHST10O43529 356 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SPOPO43791 374 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 B4GALT2O60909 372 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ERN1O75460 977 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 OR6B1O95007 311 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 RBP3P10745 1247 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ALOX12P18054 663 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ENDOUP21128 410 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 ADRA1DP25100 572 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SKIV2L2P42285 1042 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 EIF3BP55884 814 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 COPS2P61201 443 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 PRAMEP78395 509 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SPARCL1Q14515 664 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 POU4F3Q15319 338 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 WIPI1Q5MNZ9 446 aaPredicted RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 TSTD2Q5T7W7 516 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 PLEKHM3Q6ZWE6 761 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ZNF534Q76KX8 674 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ABHD13Q7L211 337 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 CAND1Q86VP6 1230 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 PLD3Q8IV08 490 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.72□□□□□ -1.331e-8■■■■■ 81.8
COPA-207ENST00000545284 LRRC56Q8IYG6 542 aaPredicted RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 KATNAL2Q8IYT4 538 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 DND1Q8IYX4 353 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 KRT222Q8N1A0 295 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 LRRC25Q8N386 305 aaPredicted RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 TMEM132CQ8N3T6 1108 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 KCT2Q8NC54 265 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 OR5L2Q8NGL0 311 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 LKAAEAR1Q8TD35 194 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ZNF480Q8WV37 535 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 TMEM171Q8WVE6 324 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 RASL10BQ96S79 203 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 SFXN3Q9BWM7 321 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 PRDM14Q9GZV8 571 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 NAT10Q9H0A0 1025 aaKnown RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 EPB41L4BQ9H329 900 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 PIGMQ9H3S5 423 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ZFP64Q9NPA5 681 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 KLHL42Q9P2K6 505 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 CAPN11Q9UMQ6 739 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 BOKQ9UMX3 212 aaPredicted RBP6.72□□□□□ -1.33
COPA-207ENST00000545284 ATG4BQ9Y4P1 393 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 IKBKGQ9Y6K9 419 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 ARID1AO14497 2285 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 DNAJC13O75165 2243 aa6.72□□□□□ -1.33
COPA-207ENST00000545284 A8MV72 311 aaPredicted RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 DEFB108AA8MXU0 73 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 PSMD12O00232 456 aaPredicted RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 SLC16A5O15375 505 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 SPRY1O43609 319 aaPredicted RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 ZBTB14O43829 449 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 MYO1DO94832 1006 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 CELA3AP09093 270 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 RNH1P13489 461 aaKnown RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 COMTP21964 271 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 CRYGSP22914 178 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 CCND1P24385 295 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 SOX3P41225 446 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 DIO3P55073 304 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 HSD17B7P56937 341 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 BTG2P78543 158 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 TNK1Q13470 666 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 CAPRIN1Q14444 709 aaKnown RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 NR1I3Q14994 352 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 STX1AQ16623 288 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 MPEG1Q2M385 716 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 KRTAP24-1Q3LI83 254 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 XKR6Q5GH73 641 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 NHSL2Q5HYW2 709 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.71□□□□□ -1.34
COPA-207ENST00000545284 THEMIS2Q5TEJ8 643 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 CCDC181Q5TID7 509 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 HECTD2Q5U5R9 776 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 SLC22A10Q63ZE4 541 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 SASS6Q6UVJ0 657 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 HSDL2Q6YN16 418 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 SHISA5Q8N114 240 aa6.71□□□□□ -1.34
COPA-207ENST00000545284 RASGEF1CQ8N431 466 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms