RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CD6P30203 668 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PCYT1AP49585 367 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PRKAG1P54619 331 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 LSM11P83369 360 aaKnown RBP eCLIP15.11■□□□□ 0.012e-11■■■■□ 19.5
SNRNP70-203ENST00000544278 MTAPQ13126 283 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SKIV2LQ15477 1246 aaKnown RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SMUG1Q53HV7 270 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PRSS36Q5K4E3 855 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 RBM45Q8IUH3 476 aaKnown RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 GANCQ8TET4 914 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 ZFP90Q8TF47 636 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 DNASE1L2Q92874 299 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PPCDCQ96CD2 204 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 ARSGQ96EG1 525 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 RAD21L1Q9H4I0 556 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 MIEF1Q9NQG6 463 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 TUBA8Q9NY65 449 aaPredicted RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 POU2F3Q9UKI9 436 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 LRRK1Q38SD2 2015 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 GRXCR2A6NFK2 248 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 TMEM229AB2RXF0 380 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PRAMEF10O60809 474 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 NDUFS2O75306 463 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SOX14O95416 240 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 ACP5P13686 325 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 OPRL1P41146 370 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PRMT2P55345 433 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SPATS1Q496A3 300 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 BCDIN3DQ7Z5W3 292 aaKnown RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 HIPK1Q86Z02 1210 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SHISA5Q8N114 240 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 CLIP4Q8N3C7 705 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SVOPLQ8N434 492 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 AADATQ8N5Z0 425 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 HDAC2Q92769 488 aaKnown RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 TAMM41Q96BW9 452 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 ARPC5LQ9BPX5 153 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 PRR14Q9BWN1 585 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 SLC6A16Q9GZN6 736 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 RERGLQ9H628 205 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 MBNL1Q9NR56 388 aaKnown RBP15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 ASIC5Q9NY37 505 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 TBC1D14Q9P2M4 693 aa15.11■□□□□ 0.01
SNRNP70-203ENST00000544278 TRIM64A6NGJ6 449 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 ANKDD1BA6NHY2 528 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 OR52A4PA6NMU1 304 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 NARSO43776 548 aaKnown RBP15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 KCNJ10P78508 379 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SHQ1Q6PI26 577 aaKnown RBP15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SLC16A12Q6ZSM3 486 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 WDR53Q7Z5U6 358 aaPredicted RBP15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SIX5Q8N196 739 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 OR56A3Q8NH54 315 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 FAR1Q8WVX9 515 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 PHOX2BQ99453 314 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 CRISPLD2Q9H0B8 497 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SLAMF7Q9NQ25 335 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 DYRK4Q9NR20 520 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 IMP3Q9NV31 184 aaKnown RBP15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 TMED5Q9Y3A6 229 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 PTPRSQ13332 1948 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 KIAA1671Q9BY89 1806 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 KLHL18O94889 574 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 NTN1O95631 604 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 CLCNKAP51800 687 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SP140Q13342 867 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 SF3B4Q15427 424 aaKnown RBP eCLIP15.1■□□□□ 0.013e-15■■■■□ 26.3
SNRNP70-203ENST00000544278 EXOC3L2Q2M3D2 409 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 FAM124AQ86V42 546 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 PJA1Q8NG27 643 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 C16orf78Q8WTQ4 265 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 CHTF18Q8WVB6 975 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 FAM129BQ96TA1 746 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 RPP25Q9BUL9 199 aaKnown RBP15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 PCDHGA10Q9Y5H3 936 aa15.1■□□□□ 0.01
SNRNP70-203ENST00000544278 TNFRSF11BO00300 401 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 ZNF197O14709 1029 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 SEC14L2O76054 403 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 C8orf89P0DMQ9 161 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 CAMK2GQ13555 558 aaPredicted RBP15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 DUSP7Q16829 419 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 GTF2IRD2BQ6EKJ0 949 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 GTF2IRD2Q86UP8 949 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 C7orf61Q8IZ16 206 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 CELF5Q8N6W0 485 aaKnown RBP15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 OR9A1PQ8NGU1 263 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 RORBQ92753 470 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 ZDHHC5Q9C0B5 715 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 TPK1Q9H3S4 243 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 DMRT3Q9NQL9 472 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 NOX1Q9Y5S8 564 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 HPCAL1P37235 193 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 PTPN5P54829 565 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 SCARB2Q14108 478 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 ADPRMQ3LIE5 342 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 CBLL1Q75N03 491 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 VN1R5Q7Z5H4 357 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 SERPINA11Q86U17 422 aa15.09■□□□□ 0.01
SNRNP70-203ENST00000544278 TMCO5AQ8N6Q1 288 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms