RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 EVA1BQ9NVM1 165 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 UCKL1Q9NWZ5 548 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 FAM120CQ9NX05 1096 aaKnown RBP17.54■□□□□ 0.4
CCT4-204ENST00000544079 ELOVL2Q9NXB9 296 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 PCDH10Q9P2E7 1040 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 UBQLN2Q9UHD9 624 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 ATPIF1Q9UII2 106 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 OGDHLQ9ULD0 1010 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 PATJQ8NI35 1801 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 TRAV19A0A0A6YYK7 116 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 TSPAN4O14817 238 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 CHP2O43745 196 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 FZD6O60353 706 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 AP2A2O94973 939 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 DARSP14868 501 aaKnown RBP17.54■□□□□ 0.4
CCT4-204ENST00000544079 SDC1P18827 310 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 EXOC3L2Q2M3D2 409 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 LAS2Q8IYD9 372 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 PIANPQ8IYJ0 282 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 MYLPFQ96A32 169 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 KCTD7Q96MP8 289 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 C16orf70Q9BSU1 422 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 POLR2J2Q9GZM3 115 aaKnown RBP17.54■□□□□ 0.4
CCT4-204ENST00000544079 ZFP64Q9NPA5 681 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 NDOR1Q9UHB4 597 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 MGAT4AQ9UM21 535 aa17.54■□□□□ 0.4
CCT4-204ENST00000544079 PRAMEF1O95521 474 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 PRPS1L1P21108 318 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 APEX1P27695 318 aaKnown RBP17.53■□□□□ 0.4
CCT4-204ENST00000544079 CLCNKAP51800 687 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 HMGA2P52926 109 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 PSAPL1Q6NUJ1 521 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 GLT6D1Q7Z4J2 308 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 ANKRD53Q8N9V6 530 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 UCN3Q969E3 161 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 FAM193BQ96PV7 902 aaPredicted RBP17.53■□□□□ 0.4
CCT4-204ENST00000544079 FAM126AQ9BYI3 521 aaPredicted RBP17.53■□□□□ 0.4
CCT4-204ENST00000544079 P2RY12Q9H244 342 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 ABHD16BQ9H3Z7 469 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 ATP6V1HQ9UI12 483 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 GLS2Q9UI32 602 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 NCKAP1Q9Y2A7 1128 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 PCDHB11Q9Y5F2 797 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 PCDHB1Q9Y5F3 818 aa17.53■□□□□ 0.4
CCT4-204ENST00000544079 IGLV3-10A0A075B6K4 115 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 CIB4A0PJX0 185 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 STK25O00506 426 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 PLOD3O60568 738 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 MOCS2O96007 188 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 CPEP16870 476 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 LIMS1P48059 325 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 CRISP1P54107 249 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SPIBQ01892 262 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SERINC3Q13530 473 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 ZNF235Q14590 738 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 IFI44LQ53G44 452 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SGO1Q5FBB7 561 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 ZNF648Q5T619 568 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 GLCCI1Q86VQ1 547 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 C3orf58Q8NDZ4 430 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 RBPMSQ93062 196 aaKnown RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 TSSK3Q96PN8 268 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 CLEC4MQ9H2X3 399 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 RPL36Q9Y3U8 105 aaKnown RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 A0A1W2PRG6 482 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 LOC730098B7Z3J9 87 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 PEX10O60683 326 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SCN2BO60939 215 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 PPM1BO75688 479 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 CELF2O95319 508 aaKnown RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 B3GALT4O96024 378 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 HBQ1P09105 142 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 EPB42P16452 691 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 ZP3P21754 424 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 LPOP22079 712 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 STK19P49842 368 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 CDKN1CP49918 316 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 RAB14P61106 215 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 HSF2Q03933 536 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 MXD1Q05195 221 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 UBXN11Q5T124 520 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 KIAA1324Q6UXG2 1013 aaKnown RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 FAM92BQ6ZTR7 304 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 TRILQ7L0X0 811 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 BBS7Q8IWZ6 715 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 OR4A15Q8NGL6 344 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SPPL2AQ8TCT8 520 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 HGDQ93099 445 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 EMID1Q96A84 441 aaPredicted RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 MED28Q9H204 178 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SLC28A3Q9HAS3 691 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 TLR8Q9NR97 1041 aaKnown RBP17.52■□□□□ 0.4
CCT4-204ENST00000544079 WWOXQ9NZC7 414 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 COQ3Q9NZJ6 369 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 RAB23Q9ULC3 237 aa17.52■□□□□ 0.4
CCT4-204ENST00000544079 SERTM1A2A2V5 107 aa17.51■□□□□ 0.39
CCT4-204ENST00000544079 C7orf66A4D0T2 115 aa17.51■□□□□ 0.39
CCT4-204ENST00000544079 KHNYNO15037 678 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms