RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 ACSL5Q9ULC5 683 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CDC14AQ9UNH5 594 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CEACAM5P06731 702 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 AGXTP21549 392 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 PCGF2P35227 344 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 PRIM2P49643 509 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 DAPP51397 102 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 MAPK12P53778 367 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 RAD23AP54725 363 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 KCNJ10P78508 379 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CTBSQ01459 385 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CD47Q08722 323 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 SIM2Q14190 667 aaPredicted RBP15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CLCA4Q14CN2 919 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CYP27C1Q4G0S4 372 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 DEPDC1Q5TB30 811 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 NFKBIDQ8NI38 313 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 C1QTNF2Q9BXJ5 285 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 ZNF717Q9BY31 904 aaPredicted RBP15.6■□□□□ 0.09
COL4A1-204ENST00000543140 YTHDF1Q9BYJ9 559 aaKnown RBP15.6■□□□□ 0.09
COL4A1-204ENST00000543140 RIBC2Q9H4K1 309 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 CLEC1BQ9P126 229 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 EBF1Q9UH73 591 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 DNAH14Q0VDD8 3507 aa15.6■□□□□ 0.09
COL4A1-204ENST00000543140 LCMT2O60294 686 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 RNGTTO60942 597 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 TRMUO75648 421 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 RPL3P39023 403 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 PIGFQ07326 219 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 LRRC74AQ0VAA2 488 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 KRT33BQ14525 404 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 RAB39AQ14964 217 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 AGERQ15109 404 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 ZC3H7AQ8IWR0 971 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 CHDHQ8NE62 594 aaPredicted RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 ABHD11Q8NFV4 315 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 SPPL2AQ8TCT8 520 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 SPATA9Q9BWV2 254 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 MS4A8Q9BY19 250 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 RHBGQ9H310 441 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 CXorf21Q9HAI6 301 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 PELI2Q9HAT8 420 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 AHSPQ9NZD4 102 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 TSC22D4Q9Y3Q8 395 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 NINQ8N4C6 2090 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 PDZK1P1A8MUH7 402 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 TMEM229AB2RXF0 380 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 TNFRSF21O75509 655 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 DNTTP04053 509 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 CRHBPP24387 322 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 DNAJA1P31689 397 aaKnown RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 IGFALSP35858 605 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 HSD17B2P37059 387 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 C7orf34Q96L11 122 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 CAMK1GQ96NX5 476 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 RUBCNLQ9H714 662 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 WASH6PQ9NQA3 447 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 AASSQ9UDR5 926 aa15.59■□□□□ 0.09
COL4A1-204ENST00000543140 HEMK1Q9Y5R4 338 aaPredicted RBP15.59■□□□□ 0.09
COL4A1-204ENST00000543140 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.58■□□□□ 0.09
COL4A1-204ENST00000543140 A0A1B0GVG6 124 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.58■□□□□ 0.09
COL4A1-204ENST00000543140 PPM1DO15297 605 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 ADAM23O75077 832 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 COL9A1P20849 921 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 CXCR2P25025 360 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 NTSR1P30989 418 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 BSGP35613 385 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 OR1E2P47887 323 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 SCARB2Q14108 478 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 C6orf141Q5SZD1 244 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 GCNT6Q5T4J0 391 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 GPR107Q5VW38 600 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 OR52N2Q8NGI0 321 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 ISOC1Q96CN7 298 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 MACROD1Q9BQ69 325 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 DOHHQ9BU89 302 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 BTBD1Q9H0C5 482 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 REEP1Q9H902 201 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 PRDM8Q9NQV8 689 aa15.58■□□□□ 0.09
COL4A1-204ENST00000543140 BCKDKO14874 412 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 FPR1P21462 350 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 TNFRSF4P43489 277 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 ADPRHP54922 357 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 ISL1P61371 349 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 RPS26P62854 115 aaKnown RBP15.58■□□□□ 0.08
COL4A1-204ENST00000543140 REEP5Q00765 189 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 BIRC2Q13490 618 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 RAPSNQ13702 412 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 TEAD4Q15561 434 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 IQCCQ4KMZ1 466 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 TMEM259Q4ZIN3 620 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 LAIR2Q6ISS4 152 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 ZNF773Q6PK81 442 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 AMER3Q8N944 861 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 IL17RCQ8NAC3 791 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 PIK3C3Q8NEB9 887 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 CNIH3Q8TBE1 160 aa15.58■□□□□ 0.08
COL4A1-204ENST00000543140 JPH3Q8WXH2 748 aaPredicted RBP15.58■□□□□ 0.08
COL4A1-204ENST00000543140 TM4SF18Q96CE8 201 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms