RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CCDC89Q8N998 374 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 GPR26Q8NDV2 337 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ADPRHL1Q8NDY3 354 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 CCDC110Q8TBZ0 833 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF398Q8TD17 642 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 HEXDCQ8WVB3 486 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 AKAP1Q92667 903 aaKnown RBP eCLIP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 GLYATL1Q969I3 302 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM159Q96B96 161 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PRR11Q96HE9 360 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 OXNAD1Q96HP4 312 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PPM1MQ96MI6 270 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 FYTTD1Q96QD9 318 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 VPS35Q96QK1 796 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SMIM14Q96QK8 99 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 GFM1Q96RP9 751 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 AGAP2Q99490 1192 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TBL1YQ9BQ87 522 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TUBB2BQ9BVA1 445 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 FICDQ9BVA6 458 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 TRIM2Q9C040 744 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 C10orf88Q9H8K7 445 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 LRRC40Q9H9A6 602 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 BPIFA1Q9NP55 256 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 WASH6PQ9NQA3 447 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SPATS2LQ9NUQ6 558 aaKnown RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 IL17CQ9P0M4 197 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 IFT80Q9P2H3 777 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF148Q9UQR1 794 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 PPP2R2CQ9Y2T4 447 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 HEMK1Q9Y5R4 338 aaPredicted RBP5.23□□□□□ -1.57
CPSF7-220ENST00000541963 U3KQA8 63 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 SPTBN4Q9H254 2564 aa5.23□□□□□ -1.57
CPSF7-220ENST00000541963 KIR2DS5A0A0G2JLQ3 304 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 A0A0G2JNG1 304 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 A0A0U1RQJ8 604 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 A0A1B0GVC2 190 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 AGAP5A6NIR3 686 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 KIR2DS3K7RE56 304 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 NTN3O00634 580 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 PRRG2O14669 202 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CEP104O60308 925 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 USP12O75317 370 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 IFNB1P01574 187 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ATP1A1P05023 1023 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 RPLP0P05388 317 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF8P17098 575 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 MSH3P20585 1137 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 IDSP22304 550 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 AK4P27144 223 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 PSMB4P28070 264 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ALDH4A1P30038 563 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 GTF2A1P52655 376 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 INHBCP55103 352 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 RAE1P78406 368 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CCL7P80098 99 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 KIR2DS5Q14953 304 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 MFSD13AQ14CX5 517 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CHRNA6Q15825 494 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 RNASE12Q5GAN4 147 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 INTS11Q5TA45 600 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF449Q6P9G9 518 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CRIP3Q6Q6R5 217 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 C16orf89Q6UX73 402 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 GSTA5Q7RTV2 222 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ADGRG6Q86SQ4 1221 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 TRIM74Q86UV6 250 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 PIM3Q86V86 326 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 C17orf82Q86X59 251 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 NRROSQ86YC3 692 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 FBXO39Q8N4B4 442 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 TTC30BQ8N4P2 665 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ESX1Q8N693 406 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 Q8N9G6 341 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 DNAAF3Q8N9W5 541 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CCL4L1Q8NHW4 92 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 WDR36Q8NI36 951 aaKnown RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ADAMTS18Q8TE60 1221 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 FGF11Q92914 225 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ULK4Q96C45 1275 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 DCUN1D1Q96GG9 259 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 MPP4Q96JB8 637 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF514Q96K75 400 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ZNF578Q96N58 590 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 NAP1L3Q99457 506 aaPredicted RBP5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CMKLR1Q99788 373 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 FAM118BQ9BPY3 351 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 TMEM121Q9BTD3 319 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 OR2AG1Q9H205 316 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ASB8Q9H765 288 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 POLR1BQ9H9Y6 1135 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 CPNE5Q9HCH3 593 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 IL26Q9NPH9 171 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 PAK5Q9P286 719 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ATXN10Q9UBB4 475 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 TLK1Q9UKI8 766 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 JRKLQ9Y4A0 524 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 ENTPD2Q9Y5L3 495 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 RNF215Q9Y6U7 377 aa5.22□□□□□ -1.57
CPSF7-220ENST00000541963 PLXNB3Q9ULL4 1909 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms