RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 C1GALT1Q9NS00 363 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 ENOPH1Q9UHY7 261 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 HS3ST2Q9Y278 367 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CFL2Q9Y281 166 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PSMD11O00231 422 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PCDH17O14917 1159 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 ZW10O43264 779 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 MPZL2O60487 215 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 POLR2EP19388 210 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 XCR1P46094 333 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PRIM2P49643 509 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CDC42P60953 191 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CYP4F8P98187 520 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 EEF1A2Q05639 463 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 CRB2Q5IJ48 1285 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 LRRC73Q5JTD7 316 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SPOUT1Q5T280 376 aaKnown RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 ATCAYQ86WG3 371 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.79□□□□□ -0.525e-8■■■□□ 17.3
NPC1-202ENST00000540608 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
NPC1-202ENST00000540608 LMLNQ96KR4 655 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 OR5M11Q96RB7 305 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 FAM83DQ9H4H8 585 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 SLC6A14Q9UN76 642 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 INSL5Q9Y5Q6 135 aa11.79□□□□□ -0.52
NPC1-202ENST00000540608 J3KTA2 159 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 M0R129 80 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CCNB2O95067 398 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 POU2F1P14859 743 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 ZNF8P17098 575 aaPredicted RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 CBLP22681 906 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CHMP24386 653 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 RPS13P62277 151 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 IFITM2Q01629 132 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 DMC1Q14565 340 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 MED22Q15528 200 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 TSTQ16762 297 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 CCSMST1Q4G0I0 132 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 OXR1Q8N573 874 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 OR56A3Q8NH54 315 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 GEMIN6Q8WXD5 167 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 FAM129BQ96TA1 746 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 SDHCQ99643 169 aaPredicted RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 CCDC32Q9BV29 185 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 PRM3Q9NNZ6 103 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 TAS2R16Q9NYV7 291 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 A0A075B6Q4 140 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 TMEM202A6NGA9 273 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 ZAR1LA6NP61 321 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CCRL2O00421 344 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 C6orf47O95873 294 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 IFNA14P01570 189 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 ADRA2AP08913 450 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 RCVRNP35243 200 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 ALDH9A1P49189 494 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 POLR2LP62875 67 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 CDK6Q00534 326 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 RAB33AQ14088 237 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 E2F2Q14209 437 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 PLAG1Q6DJT9 500 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 TRIM40Q6P9F5 258 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 NLGN4XQ8N0W4 816 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 SCAMP4Q969E2 229 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 GTPBP3Q969Y2 492 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 TRNT1Q96Q11 434 aaKnown RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 SLX1AQ9BQ83 275 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 FAM83CQ9BQN1 747 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 ITM2CQ9NQX7 267 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CLN6Q9NWW5 311 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 FBXL12Q9NXK8 326 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 NPAP1Q9NZP6 1156 aa11.78□□□□□ -0.52
NPC1-202ENST00000540608 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
NPC1-202ENST00000540608 OBSL1O75147 1896 aa11.77□□□□□ -0.52
NPC1-202ENST00000540608 COL4A6Q14031 1691 aa11.77□□□□□ -0.52
NPC1-202ENST00000540608 PRAMEF33A0A0G2JMD5 474 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 OR2AG2A6NM03 316 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 NRG2O14511 850 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 PRAMEF10O60809 474 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 CATP04040 527 aaKnown RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 SRPRAP08240 638 aaKnown RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 BMPR1AP36894 532 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 NR4A2P43354 598 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 ZNF763Q0D2J5 394 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 ZNF630Q2M218 657 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 AGAP6Q5VW22 663 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLX4IPQ5VYV7 408 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 MED27Q6P2C8 311 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 PTCHD4Q6ZW05 846 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 SLC44A2Q8IWA5 706 aaPredicted RBP11.77□□□□□ -0.53
NPC1-202ENST00000540608 FLCNQ8NFG4 579 aa11.77□□□□□ -0.53
NPC1-202ENST00000540608 AGAP4Q96P64 663 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms