RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 AMER2Q8N7J2 671 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 LILRB4Q8NHJ6 448 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 TMEM203Q969S6 136 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 SH3KBP1Q96B97 665 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 CCM2Q9BSQ5 444 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 RIOK2Q9BVS4 552 aaKnown RBP12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 ZBP1Q9H171 429 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 FAM83DQ9H4H8 585 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 SPATA6Q9NWH7 488 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 MS4A12Q9NXJ0 267 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 CHD9Q3L8U1 2897 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 REV3LO60673 3130 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 SERTM1A2A2V5 107 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 GABRR3A8MPY1 467 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 GRM6O15303 877 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 TSPAN6O43657 245 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 LRG1P02750 347 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 IGFBP1P08833 259 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 ITGAMP11215 1152 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 PRPS1L1P21108 318 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 PDHA2P29803 388 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 CCDC58Q4VC31 144 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 SMUG1Q53HV7 270 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 CADM2Q8N3J6 435 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 RASGEF1AQ8N9B8 481 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 MINDY2Q8NBR6 621 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 GPR156Q8NFN8 814 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 EFHD2Q96C19 240 aaPredicted RBP12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 MMP27Q9H306 513 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 SNTG1Q9NSN8 517 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 GULP1Q9UBP9 304 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 VPS29Q9UBQ0 182 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 NUFIP1Q9UHK0 495 aaKnown RBP12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 ITGB1BP2Q9UKP3 347 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 TBX21Q9UL17 535 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 PCDHGB1Q9Y5G3 927 aa12.06□□□□□ -0.48
SFSWAP-208ENST00000539506 MAGEB17A8MXT2 336 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 NPC1O15118 1278 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 GCM2O75603 506 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 APOL3O95236 402 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 MED26O95402 600 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 GNRH1P01148 92 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 APOA1P02647 267 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 LINC00271P0C7V0 271 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 CYP2A7P20853 494 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 FPR1P21462 350 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 BDKRB1P46663 353 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SP140Q13342 867 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 NAE1Q13564 534 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 BAK1Q16611 211 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 LRRC26Q2I0M4 334 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TBRG1Q3YBR2 411 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 ARSIQ5FYB1 569 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TSEN54Q7Z6J9 526 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TSPYL5Q86VY4 417 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 ZNF366Q8N895 744 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 NELL1Q92832 810 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TRPV5Q9NQA5 729 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 EXO1Q9UQ84 846 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 AP3M1Q9Y2T2 418 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 HAT1O14929 419 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SLC16A5O15375 505 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 MOSPD3O75425 235 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 ADORA3P0DMS8 318 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 IFI30P13284 250 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 COX7A2P14406 83 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TIMP2P16035 220 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SNRPD2P62316 118 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 RFX4Q33E94 735 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 ZFP69Q49AA0 526 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 ZC3H12BQ5HYM0 836 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 HENMT1Q5T8I9 393 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 NLRP8Q86W28 1048 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 GALNT12Q8IXK2 581 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 GPR151Q8TDV0 419 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 MED8Q96G25 268 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SDHCQ99643 169 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 GABARAPL1Q9H0R8 117 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 CHST8Q9H2A9 424 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SP140LQ9H930 580 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 TM9SF3Q9HD45 589 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 RANGRFQ9HD47 186 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 STOX2Q9P2F5 926 aaPredicted RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 MALT1Q9UDY8 824 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SLC25A13Q9UJS0 675 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SH2B3Q9UQQ2 575 aa12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 WBP11Q9Y2W2 641 aaKnown RBP12.05□□□□□ -0.48
SFSWAP-208ENST00000539506 SMLR1H3BR10 107 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 MEN1O00255 615 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 PSIP1O75475 530 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 FGF18O76093 207 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 SLC16A8O95907 504 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 RPLP0P05388 317 aaKnown RBP12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 TYRP14679 529 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 LAG3P18627 525 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 METAP1P53582 386 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 AP1S2P56377 157 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 GAB1Q13480 694 aa12.04□□□□□ -0.48
SFSWAP-208ENST00000539506 Q5BKY6 102 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms