RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TFAP2CQ92754 450 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 UBE2E3Q969T4 207 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 TESCQ96BS2 214 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 C12orf43Q96C57 262 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 MTFMTQ96DP5 389 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 APIPQ96GX9 242 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 LRRC61Q9BV99 259 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 GSDMCQ9BYG8 508 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 ZNF700Q9H0M5 742 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SPNS1Q9H2V7 528 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 NT5DC2Q9H857 520 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 COQ10BQ9H8M1 238 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 SPAG4Q9NPE6 437 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 DMRT3Q9NQL9 472 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 IMP3Q9NV31 184 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 ATAD3AQ9NVI7 634 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 ARMC1Q9NVT9 282 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 ICKQ9UPZ9 632 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 RUVBL1Q9Y265 456 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 TDRKHQ9Y2W6 561 aaKnown RBP8.47□□□□□ -1.05
DDB1-213ENST00000539332 PCDHGA2Q9Y5H1 932 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 OTOGLQ3ZCN5 2332 aa8.47□□□□□ -1.05
DDB1-213ENST00000539332 A0A1B0GVT2 93 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TCRBV3S1A0A5B6 114 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 CCDC154A6NI56 674 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 MAGEB17A8MXT2 336 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 C9JVG2 144 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 KPNA4O00629 521 aaPredicted RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 ETHE1O95571 254 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 CELA2BP08218 269 aaPredicted RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 CDH1P12830 882 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 F3P13726 295 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 HSD17B1P14061 328 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 CDH3P22223 829 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 NDUFS1P28331 727 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 HOXD12P35452 270 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TMED10P49755 219 aaKnown RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 MS4A2Q01362 244 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 C1orf61Q13536 156 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TUSC1Q2TAM9 212 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TIGD2Q4W5G0 525 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 SPIN4Q56A73 249 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PAGE3Q5JUK9 113 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 NOXRED1Q6NXP6 359 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TTC33Q6PID6 262 aaPredicted RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 LINC00299Q6ZSB3 139 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 MSANTD1Q6ZTZ1 278 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 VN1R5Q7Z5H4 357 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TAF8Q7Z7C8 310 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 C17orf64Q86WR6 236 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 SYT12Q8IV01 421 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 RNF175Q8N4F7 328 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 RAB42Q8N4Z0 105 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 C17orf50Q8WW18 174 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PIGKQ92643 395 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 VPS33AQ96AX1 596 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 EFHD2Q96C19 240 aaPredicted RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 LRRC58Q96CX6 371 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 FERD3LQ96RJ6 166 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 MTERF1Q99551 399 aaKnown RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 NRTNQ99748 197 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 DPY30Q9C005 99 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PAIP1Q9H074 479 aaKnown RBP8.46□□□□□ -1.05
DDB1-213ENST00000539332 RHBGQ9H310 441 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 ERVMER34-1Q9H9K5 563 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 CXorf21Q9HAI6 301 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 SELENONQ9NZV5 590 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 TAAR2Q9P1P5 351 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 ZNF69Q9UC07 566 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 SUSD2Q9UGT4 822 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 ADGRE2Q9UHX3 823 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PCDHGB4Q9UN71 923 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 MAN2B2Q9Y2E5 1009 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PCDHGB5Q9Y5G0 923 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 PCDHA9Q9Y5H5 950 aa8.46□□□□□ -1.05
DDB1-213ENST00000539332 C7orf72A4D263 438 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PRR33A8MZF0 331 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 NME4O00746 187 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 GALR2O43603 387 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 KDM1AO60341 852 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 IL6P05231 212 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 FCGR1AP12314 374 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 HOXB9P17482 250 aaPredicted RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 S100A1P23297 94 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SLC6A2P23975 617 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 TACR1P25103 407 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 SERPINB1P30740 379 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 CTSKP43235 329 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 STT3AP46977 705 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 CLK1P49759 484 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TMBIM6P55061 237 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 HNRNPKP61978 463 aaKnown RBP eCLIP8.45□□□□□ -1.06
DDB1-213ENST00000539332 RPS13P62277 151 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 RAE1P78406 368 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 BNC1Q01954 994 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 PRDX1Q06830 199 aaKnown RBP8.45□□□□□ -1.06
DDB1-213ENST00000539332 TUBA3CQ13748 450 aa8.45□□□□□ -1.06
DDB1-213ENST00000539332 ELOCQ15369 112 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms