RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TREML1Q86YW5 311 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 POU5F2Q8N7G0 328 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 DEFB124Q8NES8 71 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 OR8K5Q8NH50 307 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 KLHL6Q8WZ60 621 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 GFM2Q969S9 779 aaKnown RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 TM4SF19Q96DZ7 209 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 SLC41A2Q96JW4 573 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 QRFPRQ96P65 431 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 DPY30Q9C005 99 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 BRINP2Q9C0B6 783 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 MRGBPQ9NV56 204 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 CCDC167Q9P0B6 97 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 BAIAP2L1Q9UHR4 511 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 MCM8Q9UJA3 840 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 MRPS2Q9Y399 296 aaKnown RBP13.45□□□□□ -0.26
CD4-208ENST00000538827 GPR45Q9Y5Y3 372 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
CD4-208ENST00000538827 LAMA5O15230 3695 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ZNF860A6NHJ4 632 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 NTN3O00634 580 aaPredicted RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 AKAP10O43572 662 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 KIAA0754O94854 1291 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ANKRD34CP0C6C1 535 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ACPPP15309 386 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 FOLR1P15328 257 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 IL1RNP18510 177 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 GPX3P22352 226 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 TACR1P25103 407 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 BSGP35613 385 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 HPCAL1P37235 193 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 CPA2P48052 419 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 GABRA4P48169 554 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 MAPK12P53778 367 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 UFM1P61960 85 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 MAPRE2Q15555 327 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ADPRMQ3LIE5 342 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 OR4C11Q6IEV9 310 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ABHD17CQ6PCB6 329 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ZNF793Q6ZN11 406 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 RBM44Q6ZP01 1051 aaKnown RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 UBE3DQ7Z6J8 389 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 B3GNT8Q7Z7M8 397 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 SNX32Q86XE0 403 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 SLITRK4Q8IW52 837 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 PARP9Q8IXQ6 854 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 FAM9CQ8IZT9 166 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
CD4-208ENST00000538827 CHRNA10Q9GZZ6 450 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ARL8BQ9NVJ2 186 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 ZIM2Q9NZV7 527 aa13.44□□□□□ -0.26
CD4-208ENST00000538827 A0A088AWK7 358 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 TXNDC9O14530 226 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 SLC22A2O15244 555 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 SRPX2O60687 465 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 OR2B3O76000 313 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 CBX6O95503 412 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 ZNF10P21506 573 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 TPP2P29144 1249 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 ASMTP46597 345 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 ITGA1P56199 1179 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 KCNK10P57789 538 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 FOXM1Q08050 763 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 NDUFA9Q16795 377 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 DEFB134Q4QY38 66 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 TCTE1Q5JU00 501 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 FAM91A1Q658Y4 838 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 PROSER1Q86XN7 944 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 EFCAB3Q8N7B9 438 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 AMER3Q8N944 861 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 C16orf78Q8WTQ4 265 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 RNF31Q96EP0 1072 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 TEFMQ96QE5 360 aaKnown RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 ZNF717Q9BY31 904 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 ROGDIQ9GZN7 287 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 SPRTNQ9H040 489 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 LHX9Q9NQ69 397 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 SDR39U1Q9NRG7 319 aaPredicted RBP13.43□□□□□ -0.26
CD4-208ENST00000538827 SEMA5BQ9P283 1151 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
CD4-208ENST00000538827 A0A0A6YYD5 115 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 EFCAB7A8K855 629 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 HYAL3O43820 417 aaPredicted RBP13.42□□□□□ -0.26
CD4-208ENST00000538827 TMPRSS11DO60235 418 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 SLC22A3O75751 556 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 IL3P08700 152 aa13.42□□□□□ -0.26
CD4-208ENST00000538827 ESRRAP11474 423 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms