RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CLPXO76031 633 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 P2RY2P41231 377 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 MASP1P48740 699 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 C21orf59P57076 290 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 C10orf62Q5T681 223 aaPredicted RBP23.83■■□□□ 1.4
RAB40C-204ENST00000538492 ADGRD2Q7Z7M1 963 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 ANKRD13BQ86YJ7 626 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 RAD51AP1Q96B01 352 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 TMEM245Q9H330 911 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 MIEF1Q9NQG6 463 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 C1GALT1Q9NS00 363 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 TBC1D23Q9NUY8 699 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 XIRP2A4UGR9 3374 aa23.83■■□□□ 1.4
RAB40C-204ENST00000538492 A0A1W2PRB8 838 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 TBC1D3BA6NDS4 549 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 VEGFDO43915 354 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 PIK3CBP42338 1070 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 CXCR4P61073 352 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 LSM3P62310 102 aaKnown RBP23.82■■□□□ 1.4
RAB40C-204ENST00000538492 UBE3AQ05086 875 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 HEATR4Q86WZ0 1026 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 SLC15A4Q8N697 577 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 PRAMEF25A6NGN4 478 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 RTCAO00442 366 aaKnown RBP23.82■■□□□ 1.4
RAB40C-204ENST00000538492 WBP4O75554 376 aaKnown RBP23.82■■□□□ 1.4
RAB40C-204ENST00000538492 VIPP01282 170 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 PCCBP05166 539 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 CCR3P51677 355 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 FCHO2Q0JRZ9 810 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 AMZ2Q86W34 360 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 ENTHD1Q8IYW4 607 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 SMYD1Q8NB12 490 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 GIPC3Q8TF64 312 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 TFGQ92734 400 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-204ENST00000538492 LGR4Q9BXB1 951 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 RLIMQ9NVW2 624 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 PRKAG2Q9UGJ0 569 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 TAC3Q9UHF0 121 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 SNX8Q9Y5X2 465 aa23.82■■□□□ 1.4
RAB40C-204ENST00000538492 MUC22E2RYF6 1773 aaPredicted RBP23.82■■□□□ 1.4
RAB40C-204ENST00000538492 DNAJB5O75953 348 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 EPHX1P07099 455 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PSMB9P28065 219 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 IL12RB1P42701 662 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 CDH12P55289 794 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PHEXP78562 749 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 SPIBQ01892 262 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 CNTN1Q12860 1018 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 TMEM52BQ4KMG9 183 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 IFI44LQ53G44 452 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 AHSA2Q719I0 299 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PDZD3Q86UT5 571 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 DRAXINQ8NBI3 349 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PLEKHA8Q96JA3 519 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PCDHGA6Q9Y5G7 932 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 CORINQ9Y5Q5 1042 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 DOCK9Q9BZ29 2069 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 CCDC88CQ9P219 2028 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 TRANK1O15050 2925 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 RGS10O43665 173 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 DPM1O60762 260 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 PTX3P26022 381 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-204ENST00000538492 ALDH4A1P30038 563 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 CDK6Q00534 326 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 TRIM40Q6P9F5 258 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 C16orf87Q6PH81 154 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 UNC5DQ6UXZ4 953 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 SLC5A8Q8N695 610 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 SETD7Q8WTS6 366 aaKnown RBP23.81■■□□□ 1.4
RAB40C-204ENST00000538492 APH1BQ8WW43 257 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 SUSD6Q92537 303 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 TAAR2Q9P1P5 351 aa23.81■■□□□ 1.4
RAB40C-204ENST00000538492 TRPM6Q9BX84 2022 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 J3KTA2 159 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 ADAMDEC1O15204 470 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 RB1P06400 928 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 TPP2P29144 1249 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-204ENST00000538492 RPL3P39023 403 aaKnown RBP23.8■■□□□ 1.4
RAB40C-204ENST00000538492 PROX2Q3B8N5 592 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 FAM129CQ86XR2 697 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 OXR1Q8N573 874 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 UBE2E3Q969T4 207 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 ASB16Q96NS5 453 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 PITX2Q99697 317 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 KELP23276 732 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 LCTLQ6UWM7 567 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 LZICQ8WZA0 190 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 HRASLS5Q96KN8 279 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 CUEDC1Q9NWM3 386 aaPredicted RBP23.8■■□□□ 1.4
RAB40C-204ENST00000538492 SH3GLB1Q9Y371 365 aa23.8■■□□□ 1.4
RAB40C-204ENST00000538492 PSMB5P28074 263 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 FADDQ13158 208 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 CLCA4Q14CN2 919 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 EIF4HQ15056 248 aaKnown RBP23.79■■□□□ 1.4
RAB40C-204ENST00000538492 SLC9B2Q86UD5 537 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 KRT78Q8N1N4 520 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 ABHD11Q8NFV4 315 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 OR10G2Q8NGC3 310 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 ABCG4Q9H172 646 aa23.79■■□□□ 1.4
RAB40C-204ENST00000538492 AP1M2Q9Y6Q5 423 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms